Magnolia sinica: 131226076
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Entry
131226076 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131226076 isoform X1
KO
K23288
syndetin
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131226076
Membrane trafficking [BR:
msin04131
]
Protein recycling
Others
EARP complex
131226076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
131226076
NCBI-ProteinID:
XP_058077734
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Position
14:38681816..38823373
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AA seq
1114 aa
AA seq
DB search
MDFSRVGEKILSSVRSARSLGLLPAPSDRPEVPARAVAAAAVARALAGLPPHQRFTLPSG
SEELVSIYGTRPRGQIIEDLEEDFYNEDFDPVRHVLEHIPSEEDDLTYFEKKAALRLSQL
DGIAERLSCHVMEHHEEMVKGMQLVMEVEQDLKVANVICMNGRRHLTSSMHEVSRDLVVN
SNAKKKQALLDLLPVLIELRHAIDMRMALESHVEDGNYFRAFQVLSEYLQVLDSFSELSA
IQEMSRGVEVWLAKTLQKLDALLLGVCQEFKEENYITVLDAYALIGDVAGLAEKIQSFFM
QEILSESHSVLKDTVQEGPGLPNMQSRILHLCGWKPCHLERFTYSDLCLQIPESKFRLCL
LKTLSILFKLMCSYYAIMSFQPKTKDSESQISSTKRMQGSTSVCSEGVLHADSASKVSNN
SSSENGLVSEPLHELLPSPFSTEESSETGDDMSSTSGSGSPFDQLRKDAIAFVAQTLQRG
RKNLWQLTTSRVSVLLSCSAVFSTSTHQFLRNYEDINIFILAGEAFSGVEAVEFRQRLKL
VCENYFSAFHRQNVYALKMVLEKETWHKMSDTVQIISLAGLVGDGAPLIVPTDGDRAKMS
VLHSKKLSDLVETGNQKNGFAHWLNTGNPFLLKLTFSHKDCSIPQPRPKGSTVSCESDGK
IIDLLCNDMMSPRSNDTNHMNGNNSLLEDENEDLLADFIDEDSQLPSRISKPTLARNHSA
HWNIEEITAHTGSSICLLRLMDKYARLMQKLEIVDVEYFKGICQLFEVFFHFLFETFGQR
DMYLSGRGLTDSLSHRLKTALSRIAQDCDQWIKPQTMSNSLSLTTSLSPLTQMDVTPTSP
TSTNVGNAPAISFGLKERCVGAETISLVARILHRSKAHLQSMLLQNNAAVVEDFYVNLVD
SVPDLVEHIHRTTARLLLHINGYADRIANARWELKELGLEHNGYVDLLLGEFKHYKTRLA
HGGIHKEIQDLVLEYGLENVSETLIEGLSRIKRCTDEGRALMLLDLQVLINGLQHFVSIN
VKPKFQVVETFIKVNLQWAHLMQYLDVEHAWPCIEADVRLEAYYLPETEYLHWARSHPEY
SRSQIVGLINLVATMKGWKRKTRLEVLEKIEGSV
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggacttctctagagtcggagaaaagatcctcagctccgtccgatccgccagatctctc
ggccttctccctgctccgtcggatcgacccgaggttccagctcgggctgtagcagcagca
gctgttgcgagagctcttgcaggtctcccaccacatcaaagatttactcttccatcaggt
tctgaagaattggtatcaatatatggaaccagacctcgtggtcaaataatagaggatcta
gaagaagatttctataatgaggatttcgatccagttaggcatgttctagaacatattcca
tccgaagaagatgatctgacatattttgagaagaaggctgcacttagattatcacaactg
gatgggatagcagaacgattatcatgccatgttatggagcaccatgaagaaatggtgaag
gggatgcaattggtgatggaagtggaacaagacttgaaggttgcaaatgtgatttgcatg
aatggacgtagacacttaacctcgtctatgcatgaggtatcaagggatcttgttgtcaat
tcaaatgccaagaagaaacaagctcttttggacttgcttccagttctaatcgaacttcgc
catgcaatcgacatgcgtatggctctcgagtctcatgtagaagatggaaactactttagg
gcatttcaagtactgtcagagtatttacaggttttggatagtttttctgagctttctgct
atacaagaaatgagccgtggtgtagaggtttggctggcaaagacacttcaaaagttggat
gcactcttactaggagtttgtcaagagttcaaagaagagaactacataactgtactggat
gcttatgctctaataggtgatgttgctggtcttgctgaaaaaatccagagcttctttatg
caagaaattctatcagaatcccattctgttttgaaggatactgtgcaggaaggtccggga
ttacctaatatgcagagtaggatactacatctttgtgggtggaaaccttgtcacttggaa
agatttacgtacagtgatctgtgccttcaaataccagaatccaagtttaggctttgtttg
ttaaaaacactgtctatcttgttcaagttgatgtgttcgtattatgcaatcatgagcttt
cagcccaaaacaaaggactcagaatctcagatttctagcacaaagaggatgcagggcagc
acctctgtctgttcagaaggggttctgcatgctgattcagcatcaaaagtttcgaataat
tccagttctgagaatggcttagtatctgaacctttacacgagctactaccaagtccattc
tcaacagaagaatcttctgaaacaggtgacgacatgtcctctacatctggtagtggttct
ccatttgatcagctgaggaaggatgccatagcatttgttgcacaaacactacagagaggg
cggaagaatctatggcaacttacaacaagtcgtgtatctgtgttgctttcatgctccgca
gttttctcaacaagcacacatcaattcctaagaaattatgaagatataaatatattcatc
ttagctggcgaagctttttctggtgtggaagctgttgagttcaggcagagattgaagctt
gtttgtgaaaattatttttcagcttttcatcgacaaaatgtttacgcgcttaagatggtt
ttggagaaggaaacttggcataaaatgtcagacacagtccaaataattagtttggcaggc
cttgttggtgacggggctcccctaattgttccaactgatggtgaccgtgctaagatgtct
gttcttcattccaagaaattatccgatttggtcgaaacagggaaccagaagaatgggttt
gctcattggcttaataccggaaatccatttttgttaaagctgacatttagccacaaagac
tgttcaattccccaaccacggcccaaggggtcaacggtctcctgtgaaagtgatggaaaa
atcattgatcttttatgtaatgatatgatgtcgcccagaagcaatgatacgaatcatatg
aatggaaataattctcttctggaagatgaaaacgaagatcttcttgctgactttattgac
gaggatagtcagctcccaagtcgcatctccaaacctacacttgcaaggaatcactctgca
cactggaatattgaggagattacagcacatacaggatcctcgatttgccttctaaggttg
atggacaaatacgcgaggctcatgcagaaattagaaatagttgatgtcgaatactttaag
ggtatttgtcagttgtttgaggtgtttttccattttctatttgaaacttttggtcagcgg
gatatgtaccttagtggaagaggactaacagattcgctaagccatcgtctcaagacagcc
ttatcgagaatagcacaggattgtgatcaatggataaagcctcaaacgatgtcaaactct
ttgtctttgaccacatcattgagtccattaacacaaatggatgtgacacctactagccca
accagcactaatgttggcaatgcaccagctatttcatttggactaaaggaaagatgtgtg
ggtgctgagacaatctctttggttgctcggatattacataggtctaaagctcatcttcag
tcgatgctattgcaaaataatgctgctgtggttgaagatttctatgtgaatttggtggat
tctgtaccagacctcgttgagcacattcataggaccactgcaaggttgctcctccatatc
aatgggtatgcggaccgtattgctaatgccagatgggagctaaaagaacttggactggag
cacaatgggtatgttgatctattgctgggagaatttaagcattataaaacaaggctggct
catggtggaatccataaggagattcaagaccttgtccttgagtatggacttgaaaatgtt
tctgaaacgcttatagaaggtctatcacgaataaagaggtgcactgatgaaggacgagct
ctaatgttgttagaccttcaggtcttaatcaatggtctacaacattttgtctccatcaat
gtgaagccaaagtttcaagttgttgaaacttttataaaggtaaatttacagtgggcccac
ctgatgcaatacttggatgtcgaacatgcatggccttgtattgaagcagatgtccgctta
gaggcatactatcttccagaaaccgagtaccttcactgggcacgctctcatccggaatac
agtaggagtcagattgtaggattaatcaatcttgtcgcgacaatgaaaggctggaaacga
aagacaagattggaagtgctggaaaagattgaaggaagtgtgtga
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