Magnolia sinica: 131226108
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Entry
131226108 CDS
T09699
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131226108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131226108
03036 Chromosome and associated proteins [BR:
msin03036
]
131226108
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131226108
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131226108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
131226108
NCBI-ProteinID:
XP_058077784
LinkDB
All DBs
Position
14:complement(948560..976052)
Genome browser
AA seq
1043 aa
AA seq
DB search
MFGSTNPFGQSSSSPFGSQSVFGQTNNGNSNPFAPKPFGSTSPFGSQTGGSIFGGTSTGV
FGGTQSSSPLGSTPPFGASSAPAFGSSAPAFGASSSPAFGGASSSFGGSSVFGQKPAFGG
FGSTPTPTSPFGGAFQQTQSAFGSNLFGSSTPFGASTQPAFGASSTPAFGAASTPAFGAI
NTPAFGATSTPAFGSAATPAFGSTGTAFGVSSAPAFGSSGASAFGASSTPAFGASSTPAF
GASSTPAFGASSTPAFGSSTTAFGASGTPSFGFGATPAFGQSASAFGSTPFGSTPSPFSA
QSSPFGSQTTTPSFGNASPGFGQSAFGGQPGGSRVAPYTPTSEVDGGTSTQPAGKLESIS
AMPVYKDKSHEELRWDDYQRGDKGGPNPASQPASGLSFAAPSQSSPFGASAFGQTSANPF
SSTTPPNPFGQKAPTFGSSGFGSTSTPAFSSPFNATSSSSFGTSSTAPSLFGSSSAPAFG
ASSSPSLFGASSTPAFGSSNSIFGSASAPAINPGFGSSLAFGNTQSSGLFNSSTPSLGQT
ASAFGQATATFGQTTPAFGQTNPFSTPSTGFGGNLFASNSMPSLLSTSNPMGFGQTTPSL
SNAFQPAAASQPSSAFSFGNFGQTQVAQPAPSSGFGGVSNVFGQGTFGQSSAASQSNAVM
QPMPATNPFGTLPAMPQISIGRAGSAPSVQYGISSMPVADKPAPVRISALVTPRHLSQRR
IKLPARKYHPKKDGPMIPFFSNDEETPSTPKADALFIPRENPRALVIHPIDQWPSRTSAD
KQSLLKDLPTPIHENGKISEGSAPPLNGYKSQHHDKSPAENGFNKREDVFPAKSPHKLNG
VHGDQTQKSDSYIPISGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERA
EPGYCRHVKDFVVGRHGYGSIKFLGETDVRRLDLESIVQFNNREVIVYMDESKKPPVGQG
LNKAAVVTLLNIKGSNKKTGEQYTQGPKLERYKEMLMKKTQDQGAEFISYDPIKGEWKFK
VDHFSLYGLGDEGDSLTSDYHAE
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcgacgaatccttttgggcagtcatcaagtagcccatttggttcccaatca
gtttttgggcagacaaacaatggcaacagcaatccttttgctcccaaaccctttggtagt
actagtccctttggttcacagactggtggttcgatatttggtggcacatcaactggtgtg
tttggaggaacacaatcttcttctcctctaggttcgactccaccatttggtgcttcatca
gcgccggcttttggaagctcggcgcctgcttttggggcatcatcatctcctgcatttggc
ggtgcttcgtcttcctttggtggatcttctgtatttgggcagaagcctgcctttggaggc
tttggatcaactccaactccaacaagtccttttggtggtgcatttcaacaaacacagtca
gcatttggaagcaatctatttggttccagcacaccttttggtgcgtcgacccaacctgca
tttggtgcttcaagcacaccagcttttggtgcagcaagcaccccagctttcggtgcgata
aacaccccggctttcggtgcaacaagcaccccagcgtttgggtctgcagcaacaccggca
tttggtagcacaggaacagcctttggggtatctagtgcacctgcatttggttcctcgggt
gcatcagcattcggtgcttcgagtacccctgcatttggtgcttcgagcacccctgcattt
ggtgcctcaagtacccctgcatttggtgcctcgagtacccctgcatttggatcttctact
acagcttttggtgcttctggtactccctcttttggttttggagccacccctgcttttggc
caatcagcttctgctttcggtagcactccctttgggtctactccatctcctttcagtgca
cagagctctccctttgggtcccaaacgacaacaccgtcatttggaaatgccagtccgggt
tttggtcaatcagcttttggtggtcaacctgggggaagtagagtagcaccttacactcca
acatctgaggtcgatggtggcactagtacacagcctgctgggaagctggaatcaatatca
gccatgcccgtgtacaaagacaagagtcatgaggaattgaggtgggatgattatcaaagg
ggagataaagggggaccaaatcctgccagtcagcctgcaagtgggcttagttttgctgca
ccatcacagtcaagtccttttggtgcatcagcatttggccagacatctgctaaccccttt
tccagcactactcctcctaacccttttggtcaaaaagcaccaacttttggttcttctgga
tttggctccacatccactcctgctttcagctcaccatttaatgcaacctcatctagctct
tttgggacatcctctactgctccatctctatttggttcatcgtctgcccctgcattcgga
gccagttcttctccgtctcttttcggggcatcgagcactcctgcttttggctcttcaaac
tcaatttttggttctgcttcagcaccggcaataaacccaggatttggttctagcttggct
tttggtaacacccagtcatctgggttattcaattcatctactccttcccttggacagaca
gcatctgcttttggacaagcaaccgctacttttggacagactacccctgcctttggtcag
acaaatccattcagcacgccatcaactggatttgggggaaatttgtttgcaagcaattca
atgccatcacttcttagtaccagcaatcctatgggttttggtcaaacaactccttctctt
tccaatgcttttcaaccagctgcagcttctcagccatcaagtgccttttcttttggcaac
ttcggtcagacacaagtcgcacaaccagcaccttcaagtggtttcggtggtgtgtcgaat
gtttttggtcagggcaccttcgggcaatcgagtgctgccagtcagagcaatgctgtcatg
caaccaatgccagctacaaacccttttggaacactccctgcaatgcctcaaatatcgatt
ggtcgtgcgggttctgcaccctctgtccaatatggaatttccagcatgcctgttgctgac
aagcctgctcctgttagaatttctgccctagttactcctagacacttgtctcagagaagg
attaagcttccggcaaggaaataccatcctaaaaaagatggtcccatgataccattcttc
agtaatgatgaagaaacaccgagcacaccgaaggcggatgctcttttcattccgagggag
aacccaagggcgctggttattcatcccatagaccaatggccctcaagaacaagtgcggat
aaacaatctcttttgaaagacttgcctaccccaattcatgaaaatggtaaaatctctgag
ggttctgcccctcctttaaatggctacaaatctcagcatcatgataaaagcccagcggag
aacggtttcaacaagcgagaggatgtttttccagccaaatcccctcataagctaaatggg
gtccatggagatcaaacccaaaagagtgactcgtacataccaatctctggccacagggcc
ggtgaggctgcaatcgtgtatgagcatggtgctgacattgaagccctgatgccaaagctc
cggcattctgattattacacggagcctcggatccaagagctggctgcaaaggaaagggct
gaaccgggctactgccgtcatgtgaaggattttgttgttggtcggcatggctatggtagt
ataaaattcctaggtgagactgatgtgcgacggcttgatctcgagtccattgtccagttc
aacaaccgggaggtgattgtatacatggatgagagcaaaaagcctcccgttggacaaggc
ctcaataaagccgctgtggtaacgctgcttaacatcaaaggctccaacaagaagacagga
gagcaatacacccaagggccaaagcttgagaggtacaaggagatgctgatgaagaaaact
caggatcaaggggcggaattcatttcttacgatccaatcaagggtgagtggaaattcaag
gtggaccacttcagcctgtacggccttggagatgaaggcgattcgctcacctctgattac
catgcggaatag
DBGET
integrated database retrieval system
