KEGG   Magnolia sinica: 131226245
Entry
131226245         CDS       T09699                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
msin  Magnolia sinica
Brite
KEGG Orthology (KO) [BR:msin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msin03400]
    131226245
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    131226245
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C UBA_RAD5A HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 DEAD ResIII Prok-RING_4 zf-ANAPC11 zf-RING_4 HDA2-3
Other DBs
NCBI-GeneID: 131226245
NCBI-ProteinID: XP_058078008
LinkDB
Position
14:75749342..75763235
AA seq 1069 aa
MAETTTAEDAEMIEKVRLVLGPDPLDSDILRALSLVENNPNAAINIILDTPGFLRGSVTV
KRTSGGSGARIYTELKREMPEVPGEMEEKSDSNFESLAVSDRFQPLITKKGQSDICNVDL
IDLENTHFTPYLNPLPISSKKPSMNTDRRIQVYSELNQVENGEFSEEPDWFLLGRTNVVG
LSTCRGRKLEFYEIVHFSFPSVDVRRQYSGQWVSAKAAVARSEIVRFSTKRSGEIGRLPS
EWTRCLIPLVNSSKVKVCGRCMSSPLDLSLMQEIVLCISLYIHSSVFTKGDMSSWKLVAP
SHVESTVHPLPTLFKLLKMKPFKKADFTPEELNTRKRSINLKDDSEESSPMPSLVKRRKG
NYEQERGEQIVSESCLTKLVGAAEVYNLEEMDPPQTLMCDLRPYQKQALYWMSELEKGID
VEQAAKTLHPCWEGYRIKDKRASAVYLNVFSGETTTQFPSATQMARGGILADAMGLGKTV
MTIALILGKPVRESLDDQQVEEQNQDCDNKKAKNGQKDPQTKSLPTVKGGTLVVCPMALL
GQWKDELEAHSAPGALSVFVYYSGDRTNDPTVISKHDVVLTTYGVLSSSYKCDFGKDSIF
YKVEWFRVVLDEAHTIKSSRSQVAQATFALASHCRWCLTGTPLQNNLEDLYSLLCFLHVE
PWCNWAWWQKLIQKPYESGDERGLRLIKAILRPLMLRRTKESTDKEGRPILVLPPVDIHL
VECEQSEAERDFYDALFKKSKVRFDQFVAQGKVLHNYASILELLLRLRQCCNHPFLVMSR
GDTQEYSDLNKLARLFLEGHPSKSTDPISSAPTRAYIEEVVEGIRRGDITECPICLESPD
DPVLTPCAHRMCRECLLSSWRTPSSGLCPMCRMLLVKADLITCPSENRFRVDVKENWKES
SKVSKLLSCLEMIQQSGSGEKSIIFSQWTSFLDLLQVALNRKGIGFLRYDGKLGQKQREI
VLKEFSDTKEKMVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRK
VCVRRFIVKDTVEERMQQVQARKQRMIEGALTDEEVRTSRIEELKMLFR
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggcagagacaacaacagcagaagacgcggagatgattgaaaaggtccgattagttctt
gggcccgaccccctcgattctgatattctccgagcgctttcgcttgtcgaaaacaaccca
aatgccgccatcaacatcatcctcgacacacctggttttctcagaggatcagtgactgtg
aagcggacttccggtggttctggcgcacgcatctataccgaattaaagcgagagatgcct
gaagttcctggagaaatggaggagaaatctgattcaaattttgagagtttggcggtttca
gatcgattccagccattgatcactaaaaagggtcaatccgacatctgcaatgttgatttg
atcgatttggaaaatacccatttcactccataccttaatcctctcccgatttcttcaaaa
aagccaagtatgaatacagataggcgcattcaagtgtattcggagttgaatcaggtggaa
aatggggaattttcagaagagccggattggtttctattgggaaggacgaatgtggttggg
ctatcgacgtgccgagggagaaagctggagttttatgaaattgttcatttctcgtttcct
tctgtggatgttcgaaggcagtatagcggacagtgggtcagtgcaaaagcagcggtggcg
agatcggagattgttcggttctcgaccaaacgatcaggagagattgggaggctaccttcg
gagtggacaagatgcctaatcccccttgtaaattcgtcaaaggtaaaggtctgtggtcga
tgcatgtcttcaccattagatctctctttgatgcaagaaatcgtgttatgtatcagcctt
tatatccacagttcggttttcacgaagggtgacatgtcctcgtggaagttggttgctcca
tcgcatgtggaatctactgtccatccacttccaactctgttcaaattgcttaagatgaaa
ccctttaagaaggctgacttcactccagaggagcttaatactcggaaacgttcgataaat
ctcaaagatgattcagaggaaagttcaccaatgccatctcttgtgaagcgtagaaaagga
aactatgaacaagaaagaggagagcaaattgtctcagagtcatgtctgactaagcttgtt
ggcgctgcagaagtttacaatctggaggaaatggatcctcctcaaactctcatgtgtgat
ctgcggccataccagaagcaagcgctctactggatgtcggaattggagaagggaattgat
gttgaacaagcagcaaagactcttcatccatgttgggaaggttaccgtattaaagacaag
agagcttctgcagtttatctgaacgttttctcgggggagactactactcaatttcccagt
gctactcagatggccagaggaggaattttagcagacgcaatgggtcttggaaagactgta
atgactattgcattaatacttggaaaaccagttagggagagtctagatgaccaacaagtt
gaagaacaaaatcaggattgtgacaacaagaaagcaaagaatggtcagaaagatcctcaa
accaaaagcctgcccacagttaaaggaggaactcttgttgtctgtccaatggcattgtta
ggccagtggaaggatgaactcgaagcccattcagcaccaggggcactttcagtatttgtg
tactatagtggagacagaactaatgatcccactgtaatttcaaagcatgatgtggtctta
acaacatatggagtcttatcttcatcttataaatgtgactttggaaaggacagcattttt
tataaggtagaatggtttagggttgtattagatgaagcacacaccattaaatcatcaagg
tcccaagtggctcaggccacatttgcacttgcctcacattgtcggtggtgtcttactggt
acccctcttcagaataatctggaagacctctacagccttttgtgcttcttacatgtcgaa
ccatggtgcaactgggcctggtggcaaaaattgattcaaaagccttatgagagtggcgat
gagagaggattgagattgattaaggccatcctaaggccattgatgctgaggagaacaaag
gaatctacagataaagaaggaaggcctatacttgttctccctcctgttgacatccacctt
gtggagtgtgaacaatctgaagctgaacgtgatttctatgatgccctcttcaagaaatcc
aaggtcaggtttgatcagtttgtggcgcaaggcaaagttcttcataactatgcttccatt
ctcgaactgcttcttcgattaagacagtgttgtaaccaccctttccttgttatgagtcga
ggagatacacaagaatactcagacttgaacaagcttgctaggctcttcctcgaaggacat
ccttcaaaatccaccgacccaatttcgtcagctcctacccgagcatacattgaagaggtt
gtcgaggggatccgtcgaggagacatcactgagtgcccaatctgcctagaatctccggat
gatcctgtgctcactccatgtgcgcaccggatgtgcagggagtgcctactctcaagctgg
cggaccccatcaagcgggctctgtcctatgtgtagaatgctactggtcaaggctgatctc
attacgtgcccatcggagaacaggttccgtgttgatgtgaaggagaactggaaggagtca
tctaaggtgtcaaagctactcagttgtttggagatgatccaacaatcaggatctggggaa
aagagcatcatctttagccagtggacatcgtttttggatctactgcaggtggctctgaat
aggaagggaattggtttcttgaggtatgatggaaagctggggcagaagcagagggaaata
gtgttgaaggagttcagtgatacaaaagaaaaaatggtgttgttgatgtctttgaaggct
ggaggtgtaggcttgaatctgactgcagcctccaatgtgtttttaatggatccgtggtgg
aatccagcggttgaggagcaagcaatcatgcgaattcaccgtattggtcagaaacgaaag
gtgtgcgttaggcgattcatagtcaaggacacggttgaggagcgcatgcaacaggttcaa
gcaaggaagcaacggatgattgaaggtgctctcacagatgaggaagtgagaacttctcga
attgaagagctgaaaatgctatttagatga

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