Magnolia sinica: 131226247
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Entry
131226247 CDS
T09699
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131226247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131226247
Spliceosome [BR:
msin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131226247
Complex C
U4/U6.U5 tri-SnRNP related factors
131226247
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
131226247
NCBI-ProteinID:
XP_058078013
LinkDB
All DBs
Position
14:complement(11318101..11347414)
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AA seq
385 aa
AA seq
DB search
MANRTDPGAKSIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
YGGNRKPTPFMCLIMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYMRITGTVTDVYQYL
EPLYNDYRKIRHKLSDGRFSLTHVDEVIDELLTKDYSCDVALPRVQKRWLLETAGKLEPR
RSALEDDFEEEEEKEEEDQAMDGLEAGGHEKDYYRGRSPTRERDRDKKRDSHRQYRDRDY
DRERGRGRERERDRERDRDRDRDRERDRHRLRDEKDYGRERDREGRDRERRDRDRGRRRS
RSRSRSRSKDRKERDRDGGDHRKRHARSSASPRRRTDVDDGNARDEPRKKKERKEKKDDG
TDHPDPEIAEQNRIRASLGLKPLRP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcgtacggacccaggggcgaagagcatacacgggacgaaccctcagaacctg
gtggagaagatcctacggtcgaagatctaccagaacacgtactggaaggagcagtgcttt
gggctgactgccgagacgctggtggacaaggccatggagctggaccacatcggtgggacc
tacggcggcaaccgcaagcctacgccgttcatgtgccttatcatgaagatgctccagatc
cagcccgagaaggacatcgtcgtcgaattcatcaaaaacgaagactacaaatatgttcgt
gtacttggggccttttatatgcgtatcactgggaccgtcactgatgtctaccaatatctt
gagccactctacaatgattatcgaaaaataaggcataaattgtcagatggacgcttttcg
ttgacccatgtggatgaggttattgatgaactcctgactaaagactattcctgcgacgtt
gctctgccacgtgtccaaaaaagatggcttcttgaaacagccgggaagctggaacccagg
agaagtgctttggaagatgattttgaagaggaagaagaaaaagaagaggaggaccaggcc
atggatggcttagaagctggtggtcatgaaaaggattattatcgtggtcgtagtccaacg
agggaaagagatcgggataaaaaacgtgacagtcatagacagtacagggacagggactat
gatcgagaacgtgggagagggcgtgaaagggagagggacagagagagggatagggatagg
gatagggatagggagagggatcgccatcgcctgagagatgaaaaagactacggtcgggag
agggaccgagaggggagggaccgagagaggagagatagggacagggggaggcgcaggagt
cgttcgaggagcagaagcaggagcaaggaccgtaaggagcgggaccgcgatggcggggac
caccgcaagaggcatgcccgcagcagtgccagcccacggaggcggactgatgtggatgat
ggcaatgcccgagatgaaccaaggaagaagaaagaaaggaaggagaagaaggacgatggg
acagaccatccagatccagagattgctgaacagaacagaatccgtgcatctcttggtttg
aagccattgaggccgtga
DBGET
integrated database retrieval system