Magnolia sinica: 131226617
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Entry
131226617 CDS
T09699
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131226617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131226617
Spliceosome [BR:
msin03041
]
Complex A
Other components
Complex A specific factors
131226617
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_5
RRM_Nup35
zf-CCHC_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
131226617
NCBI-ProteinID:
XP_058078180
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Position
15:complement(58624498..58628183)
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AA seq
871 aa
AA seq
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MEDPAITPAETHKTLDSSSQTLDSTSFHNPLRFSETPASHLPPPNIFFSAQTLAPYDQNP
PPPPPSPPPPPETPASHDENPPLPPPEIPCFSASDPLPYADSVDSNGQEPPPPPPSETPP
SADTLASSYQHGNLPSSAEGREALAQNALPSSETVTQEKSSSGLNTAEFGNQKPLLSENG
VNATNSGTDRDYSGGEEETTSRRKRRSRWDPPSESDPQNGDVAGSSGRKRKSRWADDEPK
PIIQLPDFMKEFTGGMDVDPEVQALNIRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDN
MGIRINTREYRARERLTCERQEIISQLIKRNPAFKPPADYRPPKLQKKLYIPMKEYPGYN
FIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEAE
TQEALDAAAGMVEKLLMPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLCGEPGHRQYAC
PARTSTFKSDVLCKICGDGGHPTIDCPMKGTGKKMDDEYQNFLAELGGTAPDSLTTQNSA
LALPGSGGSGSNPPWASNTSAGGVGSTSQPGLANGAKMVKEHDDTNLYIGYLPPTLDDDA
LIRLFSPFGEIVMAKVIKDRVTALSKGYGFVKYSDVSQANQAIASMNGYRLEGRVIAVRV
AGKPPQPTVPPGPPAPLMPTYPGPPQQFTPGGPLGNPPPGSYMGAPVPWGPPPVPPPYAP
YTPPPPGSSMYTPVQGQAMPPYGAQYPTTVLTVPTGAPSQSMLSSEALQSLPPGVQSQKN
PSVQSVPNNIYGNSVAAVAPNAPPAYPPSSLGYPSYYGAVPPVHHSVVDHSQSMGSTPWA
SNPPAPQPVSSAEPVTYATDSEYEKFMAEMK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctgcaattacgcctgcggaaacccacaaaaccctagattcctcttcccaa
acactagactctacctccttccataaccctctccgtttctctgaaaccccagcttctcat
ctccctcctccaaatatcttcttctctgctcaaaccctagctccatacgatcagaaccct
cctcctcctcctccttctcctcctcctcctccagaaactccagcctcgcacgacgaaaat
cctcctcttcctcctccagaaatcccatgcttctctgcttcggatccacttccttatgca
gattccgtcgattcaaacggtcaagaaccgcctccgccacctccttccgaaaccccgcct
tcggcagacaccctagcttcttcgtaccaacacgggaatctgccatcttctgcagaaggg
cgtgaagccctagcccaaaacgcgctgccttcttctgaaacagtcacccaagagaagtcc
tcttcgggtcttaacactgctgaattcggcaatcagaagccactgctatcggaaaatggt
gtcaacgccaccaacagcggcactgacagggactactccggtggggaagaagagacgacc
agccgtcgcaagcgccggagtaggtgggatcccccgtccgaatccgacccccaaaatgga
gatgtggcaggcagcagcggccgtaagcggaaatcccgttgggctgatgatgaaccgaag
cccattatacagctccctgacttcatgaaggaatttaccggaggtatggatgtcgatccc
gaagttcaagctcttaacattaggcttcttgaaattagtcgtatgttacagtcaggtcta
cccttggatgaccgccctgaaggtgcccgctcgccttctcccgaacccatttatgataac
atgggcatccgtataaacacccgcgagtaccgtgcccgtgagagattgacatgcgagagg
caggaaatcatctctcagctgatcaagcggaaccctgcattcaagcccccggcggactac
cggccacctaagcttcagaagaagctgtacatacccatgaaagaataccctggttacaat
ttcatagggctcataattgggccgaggggaaacactcagaagcgaatggagaaggagacc
ggtgcaaagattgtgattcggggtaaagggtctgttaaggaaggtagactgcagcagaag
cgtgacttgaagccggatccgtcagagaatgaggatttacatgtgttggtggaagccgag
acgcaggaagcgcttgacgcagctgcagggatggtggagaagctcttgatgcccgtcgat
gaagggctcaatgagcacaagcggcagcagcttagggaacttgctgctttgaatgggaca
attagagacgatgaattttgtaggctgtgtggtgagccagggcaccgccagtatgcttgc
cctgctcgtacctcgacttttaagagcgatgttctctgtaaaatttgtggggatggaggg
catcccaccattgattgccccatgaagggaacagggaagaaaatggatgatgagtatcag
aacttcttggccgagttaggtggtactgcacctgattcactaactacgcagaactcagca
ttggcacttcctggttccggtggttcagggagcaatcctccttgggccagtaacaccagt
gccggaggtgttggaagcacatcgcaaccggggctggctaatggtgctaagatggttaag
gagcacgatgatacaaatctgtatattgggtacctgccgccaactcttgatgatgatgca
ctgattagactgttttcaccctttggtgagattgttatggctaaggtcattaaggatcgg
gtgactgcattaagtaaaggttatggttttgtgaagtattctgacgtgtctcaagctaat
caagctattgctagtatgaatgggtatcgccttgagggaagagttatagctgtaagagtt
gctggcaagccaccacagcctacggtacctccaggtcctccagctccgttgatgcctacg
tatcctggaccgcctcagcaatttacacccggtgggcctcttggaaacccgccacccgga
agctacatgggagcaccagttccttgggggccaccacctgttcctcctccgtatgctcct
tatacccctccacctcctggttcaagcatgtacacccctgttcaaggtcaagctatgcca
ccttatggcgctcaatatccaactacagttctgactgtacctactggtgcgccttctcaa
agtatgctgtctagtgaagcgctccagagtttaccccctggagtgcaatctcagaagaat
ccatccgtgcaatctgtacccaacaacatatatggaaattcggtagccgcagtggcacca
aatgctccgcctgcatatcctccatcttctttaggttacccatcttattatggtgcagtt
cctcctgtacatcattcggtggttgaccattcacagagcatgggaagcacaccatgggcc
tccaatccgcctgcccctcagcctgtttcatctgcagagccagtgacttacgctaccgac
tctgagtacgagaagttcatggcagaaatgaagtga
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