Magnolia sinica: 131226651
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Entry
131226651 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131226651
KO
K15082
DNA repair protein RAD7
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131226651
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
131226651
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
SAM_Ste50p
LRR_RPS2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
131226651
NCBI-ProteinID:
XP_058078242
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Position
15:73055114..73072352
Genome browser
AA seq
1203 aa
AA seq
DB search
MTVLRSGAKFPKSPKCPSSGSATPTIQPSTPLKPHEHSNSLYSPSMPSNLSSPSDPKTPL
LGLGFCPGLESSAPRRSLRLASKSNSQDATTVVSAGNRCQRNPNAGEGRGDNMNAEREGE
TSDSESNGPDKGTVDSGSGSRRKARGHGGNPDAGERNCVSPDADRSGRGSDLKSRGSDAA
VIGAVGVGRLRRSGRCRNPSAGEGNGVNLNAEREGVSSDLGLGNASGESKTERVARVLDL
DSGSAGGKSKRKHVSGFLDAAGKKSRDLVEDEGKEGVQKRLDSDGLSFSKENGRAPGFPD
KEGLKEIELVSDGHRMVKDGENEGIKKQMSELSSCSSLRYFRRKSKRLIEKGRGELASDQ
ILDLNSIAGDGNEVTDSKEAELGCNGDQIMSEDELRTGAGLRYLRRSSRLVGNEKRELGF
DLNLDLNSLVKDEKEPGLKETECSDGDRVVGEWTEENRLISENDLGLDLGLGLRCSRRSS
GRHEKGTREADIHVSLSLNSFSTDGNDNGLLNLCSGTRIVKRRIEVIDIDSDSGGDREGD
GRLANEKETDPVVRRYSKEEKGKLVLANSLSVGCDVVKLDSEVDPTINGSSTIEGERRYN
REEKGKGKLVEDNSLLIDYDAAELGADTVDVGFSDEHVFEKVTLDLMGLKELSKLENTTK
TMKPRMAGRVGQDNSKETEVVIAKGKRKRKAVERTDVVQRNKVRFLDTAKALASKFAHFI
PEEQGDDSSSHMPETERRVVENEQEIEDWPGPFSTAMRIIKDREVRLRARQGSTISDRNK
SSPVIEWKPSQDRDHMRLMRVAPLLQDLCFNLLCKNAEAITSLQGIPDSLKCKLSRWLCD
SRKMTCHVLGLIVSGSPSEICLRDCSWVTEDQLKEILGGCNTDHLRVLQFDLCGRCLPDY
ILRETLARSPNNLPSLITISLRGAYRLSDDGLTALVSSAPLLKSVNLGQCSLLTSAGIIT
LAEKLGPLLRELYIDECQSVDAMLILSALKKLKHLEVLSVAGVPNVCDKFVRELLSGCGP
NMKELALADCGELTDSSLKVIAENCSGLHALDLGGLQKLTDVAMQHLANGCRSLQALKLR
RNAFSDEGISAFLEASGESLRELSLNNLKEVAHNTAIALSARCSKTLCSLDLSWCRKLTD
EALGLIVDKCSALRLLKLFGCTQITKKFLHGHSNPLVQIVGLKAAPILTQLVVRDSLEAA
LRY
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcttacgctctggcgcgaaatttccaaaatccccaaaatgcccctcatcaggt
tctgcaactcccaccatccaaccctcgactcctttaaaaccccacgagcattcgaattct
ctatactctccttcaatgccttccaacctctcctctccttccgaccccaaaaccccgctc
ctagggttagggttttgccctggtctggaatcttcggccccaaggcgcagcctccgtctc
gcttcgaaatcgaacagtcaagatgcgacgacagtcgttagtgccggaaaccgatgccag
cggaatcccaatgcaggggaaggaagaggcgacaatatgaatgctgagagagaaggagag
acttcagattcggaatcaaacggtccggataaagggacggttgattccggaagcggtagt
cggcggaaagcgaggggccatggtgggaatcccgatgcaggagaaaggaattgcgtgagt
ccggatgctgatagatcggggaggggttcggatttgaaatcgaggggttcagatgcggcc
gttatcggtgctgtaggagtgggtcggctgaggcggagtggccgttgcaggaatcccagt
gctggagaaggaaatggcgtgaatctgaatgctgaaagagaaggggtgagttcggatttg
ggtttaggaaatgcaagtggagagagtaagacggaacgtgttgctagggttttggatttg
gattctggaagcgctgggggaaagagtaagaggaagcatgtttctgggtttttggatgct
gctggtaagaaatctagggatttggttgaagatgaaggaaaggaaggggttcagaagaga
ttggattctgatggattgagtttcagcaaagagaatggtagggctcctggttttccagac
aaggagggattgaaagaaatcgagttggtttcagatgggcaccgaatggtgaaggatgga
gaaaacgagggaatcaagaagcagatgagtgaattgagttcttgctccagtttgaggtat
ttcagacggaagagcaaaaggcttatagaaaaaggtagaggagaattagcctctgatcag
atattggatttgaattctattgcaggagatggaaatgaagtgacagattcaaaagaagct
gagttaggttgcaatggagatcagataatgagtgaggatgaattgcgtacaggtgctggt
ttgagatacttgaggcggagttcaaggcttgtgggaaatgaaaaaagagaattgggtttc
gatcttaatttggatttgaattctcttgtgaaggatgaaaaagaaccgggtttgaaagaa
actgagtgttctgatggagatcgagtagtgggggaatggactgaggagaataggctaatc
agcgagaatgacttgggtttggatttgggtttgggtttgagatgttcgaggcggagcagc
ggaaggcatgaaaaaggaacgagggaagctgacatacatgtatcgctgtctttgaattcc
ttttctacggatggaaatgacaatggactgttgaatttgtgttcagggactagaattgtt
aagagaagaattgaagtgattgatattgattctgatagcggaggagacagagaaggcgat
ggaagactggccaatgaaaaagagacggacccagttgtgagaagatacagcaaagaagag
aaggggaagttggttttggctaattcgctgtcggttggttgtgatgtggtgaagctggac
tctgaggtggacccgactatcaatggtagtagcactattgaaggggaaagaagatacaac
agagaagaaaaagggaagggcaagttggttgaagataactctttgttgattgattatgat
gccgcggaattaggcgcagatacggttgatgtaggatttagtgatgaacacgtatttgaa
aaagtgactttagatctgatggggttgaaagaactctccaaattggagaatacaacgaaa
acgatgaagcccagaatggctggaagagtgggacaggataacagtaaagaaactgaagtg
gtgattgctaagggaaaaaggaaaagaaaagctgtggaaagaactgacgttgttcaaagg
aacaaggtgaggttcttagatacagcgaaagcattagcttccaaattcgctcatttcata
ccggaagagcaaggggatgatagctcatcacacatgcctgaaactgaaaggcgagttgta
gaaaatgagcaagaaattgaagattggcctggcccgttttctacagccatgaggattatt
aaggaccgagaggtgaggctgagagctcggcaaggcagtaccatttctgatagaaacaaa
tcttcacccgtgattgaatggaagccttcgcaagatcgtgatcatatgcgtttgatgcgg
gttgctcctttattgcaagatttatgctttaaccttctctgtaagaatgcagaagcaatt
acttcactccaaggaatcccagattcactgaaatgcaaactcagtcggtggctttgtgat
tcacgaaagatgacttgtcatgttctgggtctcattgtcagtggatctccatctgaaatt
tgcttgagagattgttcatgggtaacagaagatcagctcaaagaaatcctcggagggtgc
aatactgatcacttgagggtgctacaatttgatctatgtggacgctgtttacctgattat
atattgcgtgaaaccttggctcggtcaccaaacaatttgccttcattaatcaccatatcc
ctgaggggtgcatatcggctttcagatgatgggctaacagcacttgtctcttcggcacct
ttactaaaatctgtaaatttgggccagtgttcccttcttacctcagccggaatcataact
ctagctgagaagttgggaccattactgagggaattgtatatagatgaatgccagagtgta
gatgcaatgttgattctctctgctttgaagaagctcaagcatctggaagtgttgtcggta
gctggggttccaaatgtttgtgacaaatttgtccgcgagcttctttctggatgtggtcca
aatatgaaggaacttgctctggcggattgtggggaattgactgacagttccttgaaagtc
attgcggaaaactgttctggattgcatgctcttgaccttggtggcttgcaaaaactgact
gatgtggcgatgcaacaccttgccaatggttgtaggtcacttcaagcacttaagcttcgg
cgcaatgctttcagtgatgaaggcatatctgcgtttctggaagcatctggagagtcattg
agagaactttcactcaataatctcaaagaggttgctcacaatactgccatcgcactttct
gcccgttgttccaaaacactttgcagtttggatctgtcttggtgccgcaaattgacagac
gaggcacttggattgatcgtggataaatgctcggcactgaggttgctcaagctgttcgga
tgcactcagataacgaagaagttcttgcatggccactctaatcctcttgttcagattgtt
ggactgaaggcggcgccaatactaacgcagctggttgtacgagattctttagaagctgca
ttacgatattag
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