Magnolia sinica: 131227063
Help
Entry
131227063 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131227063
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
msin03015
mRNA surveillance pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131227063
09122 Translation
03013 Nucleocytoplasmic transport
131227063
03015 mRNA surveillance pathway
131227063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131227063
03041 Spliceosome [BR:
msin03041
]
131227063
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131227063
Spliceosome [BR:
msin03041
]
Complex C
Other components
EJC/TREX
131227063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
131227063
NCBI-ProteinID:
XP_058078751
LinkDB
All DBs
Position
15:complement(8722233..8732562)
Genome browser
AA seq
740 aa
AA seq
DB search
MSMQDPSLWDRPLLQWRVMELKYELKRRNRPTNGLKEDLVRRLKEVLNEEQREKKEIGNE
FTSSQPTANSDTVKEGCVEADDGDGSESEKSQLVGDDMNSANNDGNSRVVGLDKINGDQS
MKSEKALVLDDDVSSVNNDNSGGLAGLDQVHGDQDVKLAYKFDPECSEVDNVVVVPVENS
YSIDSQNDFCRNELKEADALVADESQLPISRTSYQVTETVSQVVNCPSTCPLSINQENEL
KSDLNTKSVHLVPASMNTEVLHLVSNDGGGINMSNVQVESGRQIATERVEVSHAVDVDVS
DQNVGIGGGPSENFNGGGNFLGESVEEDVMEKQMIDAISNDEDTREKIDIPESLQVEEDD
AFDAVADQYSVDDNCFSGKSESLDQHGQKRKIEDEPPSESKSLRRQRKRNGVNELKMIEF
GQLSCVEAEAFKLAEVPGKSPTAAPAPNYPRPRDGPKLIPLPARSDSSLHGDILMERIVP
PPQRSPTTSLRIDNFLRPFTLKAIQELLSKTGTVCSFWMDEIKTHCYVTYSSVEEAVATR
DALYNSQWPMNGGRLLIVEFVDPGDVKVKVEGPQAPPSTVPALTSSRVRATPPPSKFQRL
RQTLQPLGQQPLPPRQQQPPLPPRQQLPMPPRQQLPPPPPPRQQLPPPPKQPLSPPRQQL
PPPPPLPLPPPYPHPSSVRERLLPPPPRNLNPPVTLDDLFRKTRTNPRIYYLPLSEEQVV
AKLAATSASHNESVDIHSRQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcaagacccttcgctttgggatcgtccccttcttcagtggagggttatggag
ttgaagtatgagcttaagaggaggaatagaccaacaaacggtttgaaggaggacttagtg
aggcggctcaaagaagtcctcaatgaagaacagagggagaaaaaagaaattggcaatgaa
tttactagttctcaaccaactgccaattcagacacagttaaggaaggatgcgtggaagct
gacgatggtgatgggtctgaatcagagaagtcccagctggtgggtgacgatatgaattca
gctaacaatgatggtaattccagagtggtgggtcttgataaaatcaatggagatcaaagc
atgaaatcagagaaggccctggtgttggatgacgatgtgagttcagtgaacaacgacaac
agtggcggactggcaggtcttgatcaagttcatggagatcaagacgtgaaattggcatat
aaatttgatcctgagtgcagtgaggttgataacgttgttgtcgtcccagttgaaaacagc
tattcaattgattctcagaatgacttttgcaggaatgagttgaaggaagcagatgctctg
gttgctgatgaaagccaactccctatatcccgaaccagttaccaggtaactgagacagtc
agtcaggtggtaaactgtccttctacttgccctttgtcaattaatcaagaaaatgaacta
aagagtgatttgaatactaaaagtgtccatttagtacctgcatcaatgaatactgaggtg
ttacaccttgtttctaatgatggtggtggtatcaacatgtcgaatgttcaagttgaaagt
ggtcggcagattgctactgaacgggtagaggttagtcatgcagtggatgttgacgttagt
gaccaaaatgttggtattggtggtgggccttcagaaaatttcaatggtggtggaaatttt
cttggagaatcagtggaagaggatgtgatggagaaacagatgatagatgccatctcgaat
gatgaggatacaagagaaaagattgacatccctgaatctcttcaggtggaggaagatgat
gcatttgatgctgtggcagatcaatactctgtcgatgataattgtttttctggcaagagt
gagtctttggatcagcatggccaaaagagaaaaattgaagatgagccaccatcagagagc
aaatctttgagaaggcagcgcaaacggaatggtgtgaatgagttaaagatgattgagttt
gggcagctttcctgtgtggaagcagaggcattcaaactggcagaagttcctggaaaatct
cccactgctgccccagctcccaattatccaagacctagagatggtcccaagttgattccc
ctgcctgccaggtctgattcctcacttcatggagacatcctgatggaacgaattgttccc
ccaccgcagcgatctccaacgacttctttgagaatagacaatttccttcgaccatttaca
ttgaaagctatacaagagcttctctcaaagactggaactgtctgcagcttctggatggat
gagatcaagactcattgttatgtcacgtattcttcggtggaggaagcagtggcaacccga
gatgcactatacaattcccagtggcctatgaatggtggccgtctattgattgtcgagttt
gttgaccctggagatgtcaaggtcaaggtcgaaggacctcaagcaccaccatcaactgtt
cctgcgttgacctcttctcgtgttcgggcaacaccaccaccttcgaagtttcaacgtttg
cgtcagacactgcagccccttggtcagcaacctctgcctcccagacagcagcagccgcct
ctaccacccaggcagcagctccctatgccccccaggcagcagctacctccacctccacca
cccaggcagcagctgcctccaccaccaaagcagccactatcaccaccccgtcagcagttg
cctccaccacctccgcttcctctgccgcccccctacccccatccttcctctgtccgagag
aggcttttgccgccgcctcccaggaatctcaatccacctgtgacacttgatgacctattc
aggaaaacacgcactaatcctcgcatctattaccttcctctttcagaagaacaagttgtt
gccaagttggcggccacctctgccagtcacaatgagagtgtggatatccatagtaggcag
tag
DBGET
integrated database retrieval system
