Magnolia sinica: 131227099
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Entry
131227099 CDS
T09699
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
msin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131227099
03460 Fanconi anemia pathway
131227099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131227099
03400 DNA repair and recombination proteins [BR:
msin03400
]
131227099
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131227099
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131227099
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
131227099
Bloom's syndrome complex (BTR)
131227099
FA (Fanconi anemia) pathway
131227099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
RecQ_Zn_bind
DEAD
DUF885
Motif
Other DBs
NCBI-GeneID:
131227099
NCBI-ProteinID:
XP_058078789
LinkDB
All DBs
Position
15:complement(74217408..74235531)
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AA seq
645 aa
AA seq
DB search
MENQVAILKEKRVPAEYLSSTQTQHVKEKIYEDLDSGKPSLRLLYVTPELVATHGFKSKL
TKLYTRGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRKHLPDVPVLALTATAVPKVEKD
VIDSLCLLRPLVLRASFNRPNIFYEVRYKDLLDDTCADLCNLLKSSGDVCSIVYCLERTA
CDDLSGHLSKAGISCAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAKFQGIDRKDVRFV
CHFNIPKSMEAFYQESGRAGRDQLPSRSVLYYGLDDCKRMEFILSSTGGKKSQSSNSQDG
LLKKSLADFNQMVEYCEGSGCRRKKILESFGEQVPASFCGKSCDACKHPNLVAKYLKELA
NIPSNCQKNGPSPVFISRLSTTAAEDQETEFWNRDDEASCSDEDISDSDDGMEVVNSLAR
SKFSSKSRLSERIECLQRAEEAYYQKKDPNKQTGGLGDKKAISEALREAAKQRLSNALKQ
AHQRLGDLLIDSEASAAVLENECYKKYSKVGKTFYNSQVASTVRWLSSSNSKQISDRLGT
NSIQNNDDSKPNIASSSSVERTTDHDQLLAEANKEENHGIAQSEASFKSIQMELPPREAA
PPPIPSFSEFVTKKGKVGQSNLSPSVRTQTNTHLRNDAEKRRRLQ
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccaagtagcaatattgaaggaaaaaagagttccggcagaatatctttcctca
acccaaacacagcatgtcaaagagaagatttatgaagacctagattctggaaagccatcc
ttaaggttgctgtatgtgacaccagaactggttgcaacacatggattcaagtcaaagcta
acaaagctctatactagaggactgttaaacctaattgccatagatgaggcccattgcatc
tccacatggggccacgactttaggcctagttaccgcaaactttcgtctctaaggaagcac
cttccagatgtgccagtattggctttgacagccactgccgttcctaaagttgaaaaggat
gtgatagactcattgtgcttgctacgccctctagtcctgcgtgcatccttcaatcgtcct
aatatattttatgaagttcggtataaagatcttttggatgacacctgtgccgatttgtgc
aatcttctcaagtcgagtggagatgtctgctcgattgtttactgccttgaacgcacagca
tgcgatgatttgtctggtcatctatcaaaggctggcatttcttgtgctgcttaccatgca
gggttgaacaataaactccgcagctctgttttagatgactggatttcttccaaaatacaa
gtcgttgtagcaacagtggccaaatttcagggtatagatagaaaggatgttcggtttgtc
tgccacttcaatattcctaagtcaatggaagccttctatcaagaatctggaagagctggc
cgtgatcaattgccttcaagaagtgttttgtactatggcttggatgattgcaaaagaatg
gaattcattttgagcagcactggaggaaaaaagtcccaatcttcaaactcccaggacggt
ttgttaaaaaaatctctggcggacttcaatcagatggtcgagtactgtgaagggtctggc
tgtcgcaggaaaaaaattcttgagagttttggagaacaggttcctgcatcattttgtgga
aaatcatgcgatgcatgcaagcatccgaacctagttgctaagtatttgaaggaacttgcc
aacattcctagcaattgccagaagaatggaccgtctcctgttttcatcagcagattgtcc
actacggctgcagaagatcaagaaactgaattctggaatcgtgatgatgaagcaagctgt
tctgatgaagatatatctgattctgatgatggcatggaggttgtgaacagcctagccagg
tcaaagttctcttcaaagtcaaggctaagtgagagaattgaatgcctacagcgtgcggaa
gaggcttattatcagaaaaaagaccccaataaacagacaggcggtcttggggacaagaag
gctatatcagaagccttgagggaagcagccaaacaacggttgtcaaacgctctaaaacag
gcccaccagcggctcggtgatttgctaattgattccgaggcatccgccgcagtacttgaa
aacgaatgctacaagaaatacagtaaggttggaaagacattctacaattcacaagtcgcg
agcacagtcagatggctatcatcatcgaattcaaaacagatcagtgatcgtctgggcacc
aattctattcagaataacgatgattctaagccgaacattgcatcttcttcgtctgtggaa
aggaccacagatcatgatcaactgcttgcagaagcgaataaagaagaaaaccatggcatt
gctcaatcagaagcttcttttaaatccatacagatggagcttccccctcgagaggcagca
cctcctcccatcccctcgttttcggagtttgttactaagaaagggaaggtgggccaatca
aatctttcaccgtccgtgagaacgcagacgaatacacacctgaggaatgatgcagagaag
aggaggagactgcaataa
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