Magnolia sinica: 131227401
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Entry
131227401 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131227401
04121 Ubiquitin system [BR:
msin04121
]
131227401
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131227401
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131227401
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131227401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-HC5HC2H
zf-RING_10
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
131227401
NCBI-ProteinID:
XP_058079180
LinkDB
All DBs
Position
15:951333..954216
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AA seq
345 aa
AA seq
DB search
MGEALVARYWCHMCSQMVDPVMEVEIKCPFCESGFVEEMDSRGDDEDLGSDRTFSLWAPI
LLGMMGSPSRRRRFRRHEEEEDEETRGESELERDIESILRRRRRSSAAILQLLQGLRAGI
ASESENPESEREQEREREREHVILINPFNQAVILQGSFDSNQGENESSNIHGSLGDYFIG
PGLDLLLQHLAENDPNRYGTPPAQKEAVEAMPTVKITENLQCSVCLEDFDIGLEAREMPC
KHKFHNGCILPWLELHSSCPVCRYQIPADGSKDSNGSDNSNRVESSGVELSTEGGSGNGR
RFWAPVPWPFNGLFSPSESQTDGNSSTSASSSSAASGSSTHADEN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagctcttgttgcaaggtactggtgccacatgtgctcgcaaatggtggatccg
gtcatggaagtcgagatcaagtgtccattttgcgagagtgggtttgtggaagaaatggat
agcagaggagatgacgaggatctcggatcggatagaactttctccctttgggctcccatc
ttgctcggaatgatgggtagcccgtcccgccgccgaagattccgaagacatgaagaagaa
gaagatgaagaaactcggggagaatcggagctagaacgggacattgaatcgatcctgcgg
aggaggaggaggagctccgctgcgatcctccaattgcttcagggcctccgtgcaggcatc
gcatctgaatcagagaatcccgaaagcgaaagggaacaagagcgagagagggagcgagag
catgtgattctcatcaatcctttcaaccaggctgtgattcttcaaggatcgtttgattcg
aaccagggcgagaatgagagctcgaacatccatggctctttgggcgattacttcattggg
cctggtttggatctcttgctgcagcatctggcagaaaacgatccgaaccgatatgggaca
ccaccagcgcagaaagaggcagtcgaggcgatgccgactgtgaagatcactgagaattta
cagtgttcggtctgtttggaggatttcgacattgggttggaggcgagagagatgccatgc
aagcataaattccataatggctgtatcttgccgtggctcgagcttcatagctcgtgtcca
gtgtgcagatatcagattcccgcagatggttctaaggattcaaatgggtctgataatagt
aatagagttgagagcagtggtgttgagctgagcactgaaggtgggagtgggaatggtaga
aggttctgggcccctgtcccgtggccttttaatgggttgttttcgccatccgaatctcag
acagatgggaattcttctacttcagcttcttcatcatcagcagcatccggaagtagtact
catgctgatgagaactga
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