Magnolia sinica: 131228002
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Entry
131228002 CDS
T09699
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A isoform X1
KO
K14026
SEL1 protein
Organism
msin
Magnolia sinica
Pathway
msin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131228002
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_2
TPR_1
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
131228002
NCBI-ProteinID:
XP_058079799
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Position
15:complement(47537348..47581667)
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AA seq
671 aa
AA seq
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MRRGKLLSHLLIFSVLVLSLLALSVTGRPFVLLLSKDDLKDNPSSSDDSPGDSSDWDEFG
DSQTQSEDDLDPGSWRPILDPTSSNSSSSSSSSEEAIYFDGIRSMISAASAGDPRLMEEA
ASEIEASAGRGFPHAQSALGFLHGMGCMRDQSTAKAFLYHHFAAEGGNMQSKMALAYTYF
RQEMYEKAVKLYAELAESAVASFLISKDPPVIEPIRIHAGAEENKEALRKSRGEEDEDFQ
ITEYQARKGNAAAMYKIGIYYYFGLRGVRRDHTKALSWFLKAVEKGEPRSMELLGEIYAR
GAGVERNYTKALEWLTLASKQQHFSAYNGMGYLYVKGYGVDKKNFTKAKEYFEKAAENDE
PGGHYNLGVLYLKGIGVKKDVKTACRHFITAANAGQPKAFYQLAKMFQTGIALKKNLQMA
TALYKLVAERGPWSSLSRWALESYLKGDVGRAFLLYSRLAELGYEVAQSNAAWILDKYGE
RSMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTERDYERAAEAY
NHAHMQSNAQATFNLGYMHEHGQGLPFDLHLAKRYYDRALEYDPAAKLPVSLALTSLWIR
KNYADSFLVDLIDSLPQVYPRVGAWVEDVVMDEGNATILTLMVCLLTVLYLRERQRRHAV
APPLQPNDAPN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcggcaaactgctctcccatctgctcatcttctctgtcctcgtcctttctctc
ctcgccctctccgtcacaggacgccccttcgttctccttctcagcaaagacgatctcaaa
gacaacccttcctcctcagatgactcgccgggtgactcgtccgactgggacgagttcggc
gattcccagactcagtccgaagatgatctcgacccaggctcatggcgccccatactcgac
ccaacctcctcaaactcctcctcttcctcctcctcctccgaagaggccatctatttcgac
ggcatccgtagcatgatctccgcggcctcggccggcgacccccgattgatggaggaagct
gcgtctgagatcgaggcctcggccggccggggcttcccgcacgcccaatcggcgttgggg
tttctgcacggcatgggctgcatgagagatcagagcactgcgaaggcgttcttataccac
cactttgctgcggagggcggcaacatgcagtccaagatggcactagcgtacacatacttc
cggcaagagatgtatgagaaggctgttaagctttatgccgaactagccgaatctgcagtg
gcgagctttttgatctccaaggacccaccggtgatcgagcctatcaggatccatgctgga
gctgaggagaacaaagaagcattgcggaagtcacgtggagaagaggatgaagacttccag
attacagagtaccaagcacggaaagggaatgctgcagcaatgtacaagattggcatatac
tattattttggcttgagaggggtaaggcgcgaccacacgaaggcactttcttggtttttg
aaagccgttgagaagggggagccaagatcgatggagcttcttggtgagatctatgcgagg
ggagccggagtggagaggaactacacaaaggcgcttgagtggcttacgcttgcatcaaag
caacaacatttttcagcatataatgggatgggttatttgtatgtcaaaggatatggagtg
gacaagaagaatttcacgaaagcaaaagagtactttgagaaggctgcagagaatgatgag
cctggtgggcattataacctgggggtactatatctcaaagggataggtgtgaagaaggat
gtgaagacagcatgcaggcattttataactgcagctaatgctggtcagccaaaggccttt
taccagttggcaaagatgttccagactggcattgccctcaaaaagaatcttcagatggct
actgcattgtacaaattagttgcagagagagggccttggagttccttatcaaggtgggct
ttagagtcttacctgaaaggtgatgtgggcagagcattcctcctgtactcaagattggcg
gagcttggatatgaggtggcacagagcaatgctgcttggattcttgacaaatatggggaa
cgcagtatgtgcatgggagaatctggattctgcacagatgcagaaaggcaccaacgtgca
cattctttgtggtggcaagcttctgaacagggcaacgaacatgctgctttgctgattggg
gatgcatattactatggtcggggtactgagagagactatgaacgtgctgcagaggcttac
aatcatgcccacatgcagtccaatgctcaagccacgttcaaccttggatacatgcacgag
catggacaggggcttccttttgatcttcatttagcaaagcgttattatgatcgggcactg
gagtatgatcctgcggcaaagttgcccgtctctcttgctctgacgagcttgtggattcgg
aagaactatgctgacagtttcctggtcgatttgattgattcgctcccccaagtctacccc
agagtgggagcatgggtagaggatgtggtcatggatgaagggaatgcgaccatccttacc
ctcatggtctgcctgttgacagtcctttatctccgtgagcggcaaagacggcatgctgtg
gcacctcctctccagcccaatgatgcacccaactaa
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