Magnolia sinica: 131228033
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Entry
131228033 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131228033 isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131228033
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
90S particles
Other 90S particles
131228033
Pre-60S particles
Other pre-60S particles
131228033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
Tti2
HEAT_GCN1
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
131228033
NCBI-ProteinID:
XP_058079847
LinkDB
All DBs
Position
15:complement(75546573..75571127)
Genome browser
AA seq
1295 aa
AA seq
DB search
MEGLQMEDEIPTVYPLLHESQDICAHFLSLYKASPREDHQHLCAVVGAISQELQDHSLPL
TPTSYFAATISSLDRISDQSSSSDPIITALLTLLSSILPLISTAVLRVRGDSVLDAVRRF
LGFGPEAVPAGTAKAGLKCVSHLMISGEKGGWESVGSAYRLLLEFVTDPRPKVRKHSHSC
LHDVLQSFQGSAVLTPASEGITKVFERFLLLAGGSDPTGANAGEGPKGAMEVLYILGALK
DCLPLMSPKFTTNILKHFKSLLELHQPIVTRHIVNILHALCSSQSSEFAPEVLLDLLCVL
ASSLSVREKSADGMTFTARLLLVGIGKVYALNRQICVVKLPLVFNTLGEILACEHEEAIF
AAAEALKGLIHTCIDESLIKQGVDQIKLNPDGDTRRSAPTIMEKICATVEGFLGYQYSAV
WDMAFPILSAMFDKLGESSSCLMRGTIKTLEDMEKLPDEDFTCRKQLHECVGSALGAMGP
EIFLSILPIKLDAEDMSEANVWLFPILKQYTVGARLSFFTQSILGLVGRMRQKSQMLEKE
GRIFSSRSTEALVYSLWSLLPAFCNYPVDTANSFGGLTKALCHALREEPDVRGIICSSLQ
TLIQQNKRVSAGNTDPADRDISIPEQRARDHYTPQVAADNLKTIRASSPEFLSVLSGVFL
KSSKDSGGCLQSTIGEFASISEKKVVKSFFKTTMKKLLKATQEAVQVEKLSKSNSMQVDA
SADESSPSLARALLLDLAVSLLPGLDAEEVELLFVAIKPALKDEEGLVQKKAYKILSIIL
RECEEFLSCKLDDLLELMIEVLPSCHFSAKHHRLDSLYFLIVHVSKGASEQRKRDIICSF
LTEIILALKEANKKTRNRAYDLLIKIGHACGDEEHGGKKENLQQFFNMVAGGLAGETPHM
ISAAVKGLARLAYEFSDLISAAYNVLPSAFLLLQRKNREIVKANLGLLKVLVAKSQTEGL
QTHLKSMVEGLLKWQDDTKNHFKAKVKLLLEMLVKKCGLDAVKAVMPEEHMKLLTNIRKT
KERNERRIAAKSEAETRSLHSRASTSRQSRWNHTNIFSDFGAEDTDDSDAEHMDVTTASG
KGSKFASKLNSKAASSRSMRMRRTAKSLPEDLFDQMEDDPLDLLDRQKTRSALRSSDHLK
RKPESDDELEIDSDGRLVIREDGKSKKREKPPSSDLDPDSRSKAGSHLSRNSSSTKVQKR
RRTSDSGWAYMGSEYTNKKAGGDVKKKDKLEPYAYWPLDRKMLSRRGEQKAVARKGMASV
MKLTKKFEGKSAANALSMKGLKMRGKQKKGNKKIK
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacttcagatggaagacgaaatcccgaccgtctatcccttgctgcacgaatcc
caagacatctgcgcccatttcctctccctctacaaggcctccccacgcgaagaccaccag
cacctatgcgccgtcgtcggcgccatctcccaagagctccaggatcactccctccccctc
actccgacctcctactttgcggcgacgatctcatccctcgaccgtatctccgatcaatcc
tcctcgtccgatcccatcattacggccctcctcacgctcctgtcctcaattctcccgttg
atctcgaccgccgtcttgagggtcagaggggattcggtcctcgacgccgtgcggaggttt
ttagggtttgggccggaggcggtgccggctgggactgcgaaggcggggctaaaatgcgtc
tcgcacctgatgatctctggggagaagggcgggtgggagagcgtgggctccgcatatagg
ttgcttctcgagttcgttacggatcctcgtccgaaggttaggaaacattcccattcgtgc
cttcacgatgtcctacaaagctttcaaggatcagcagtcttgacaccggcgagtgaagga
attacaaaagtttttgaaaggtttcttctccttgcgggcgggtctgatcctactggcgcg
aatgctggggaaggaccaaaaggagctatggaggtgttatacattctcggggctctgaaa
gattgtcttcctcttatgtcaccgaaatttacaactaacattctgaagcacttcaaatcg
ctcttggaactgcaccaaccgattgtcacgaggcatatagtgaatattttgcatgcgctg
tgctccagtcagtcttcggagtttgctcctgaagtgttgctggatctcttgtgcgtgtta
gcatcgtctctttcagtcagggagaaatcagcggatgggatgacatttacggcacgcttg
ctgcttgttggcattggaaaggtttatgctctgaacagacaaatatgcgtagtgaagctt
ccccttgttttcaacacacttggagaaatattagcttgtgagcatgaagaggccatattt
gcggccgcagaggcactgaaaggtttgatacacacttgcattgatgaaagcctgattaaa
caaggtgtggatcagataaaactcaatccagacggagacacaaggaggtctgcaccaacc
atcatggaaaaaatatgtgctactgttgagggtttccttggctaccagtatagtgcagtc
tgggacatggcatttcccattctttcggcaatgtttgataaattaggcgaatcttcttca
tgtctgatgagaggaaccattaagactttggaagatatggagaagcttccagatgaagac
tttacttgcagaaaacagctgcatgaatgtgtcgggtcagcccttggtgcaatgggacct
gagatctttttaagcattctaccaatcaagttggatgctgaagacatgtctgaagctaat
gtttggctgtttcctattttgaaacaatatactgttggtgctcgtttaagtttctttaca
cagtctattttgggtttggttggacgcatgcggcagaaatcacaaatgcttgagaaagaa
ggccggattttctcatcaaggagcactgaagcacttgtatattctctatggtccttgtta
cctgcattttgcaactaccctgttgacactgctaatagctttggtggtcttacaaaggca
ttatgccatgcacttcgtgaagagcctgatgtacgtggaataatatgttccagtttgcag
actcttattcaacagaacaagagagtgtctgcaggaaacactgatccggctgatagagat
attagtattcctgagcagagagctagggatcattatacgccacaggtagcagctgataat
ctgaagacaatcagagcatcgtctcccgagttcctctcagttctatctggagtcttctta
aaatcttcaaaagacagtggtggatgtttgcagtccacaattggggagtttgcttccata
tcagaaaagaaggttgtcaagagtttcttcaaaactaccatgaagaaacttttgaaggca
actcaagaggctgttcaagtggagaagcttagcaaatccaattctatgcaggttgatgct
tcagctgatgagagttcaccatcacttgcaagggccctgctattggacttggcggtgtca
cttctgccaggattggatgcagaagaggttgaattactattcgttgcaataaagcctgca
ttaaaggatgaagagggtttggtccagaaaaaggcgtataagattctttcaattatcctt
agggaatgtgaagagttcctttcatgtaagctggatgacttgcttgagctgatgatagaa
gtgcttccttcatgtcacttttcagccaagcatcacaggcttgacagcctgtacttctta
attgtccatgtttccaagggtgcatcagagcaaaggaaacgggacatcatatgttctttt
ctcaccgaaataattctagccttgaaagaggctaataaaaaaacaagaaatagggcttat
gacctgctcatcaaaattggccatgcatgtggagatgaggagcatggtggcaagaaggaa
aatttacaacagttctttaacatggtagctggaggcctggctggcgagacaccccacatg
atcagtgctgcagtcaaaggactagctcgcttagcttatgaattctctgatctcatatct
gcagcttacaacgtgcttccatcggcctttctcctcctgcagagaaagaatagagaaata
gtcaaagctaatttaggtttgctgaaagtgttggtggccaaatcccaaaccgaggggtta
cagacacacttgaagagtatggttgaagggttgctgaagtggcaagatgataccaagaac
catttcaaagccaaggtcaagttacttcttgaaatgctcgtgaagaaatgcggtctagat
gctgttaaggcagtaatgcctgaggaacatatgaaactgctaaccaatataaggaagaca
aaggagcggaatgaacgaagaattgcagcaaagtcagaggcagagacaagatctcttcat
tcaagagccagtacctccaggcaaagcagatggaatcataccaacatattttctgatttt
ggagctgaggatacggatgacagtgacgcagagcatatggacgtgaccacggcctctggt
aaagggagcaagtttgcctccaagctcaactcgaaagccgcatcctcaaggtccatgcga
atgcgccggacagctaagagcttgccagaagacttgtttgatcagatggaagatgaccca
ctcgatttgctggaccgacagaagacaaggtcggccctccgatcctcggatcacctcaaa
aggaagccagaatctgatgatgagttagagatcgactctgatgggcgcttggtcattcgt
gaggatggaaaatctaagaagcgagagaagcccccatcctcagaccttgatcctgactcg
aggagcaaagcaggaagtcatctgtcaaggaactcttcttcaacaaaggtgcagaagcgg
cggagaacatcagattccgggtgggcatacatggggagcgagtacacgaacaagaaggca
ggtggggatgtgaaaaagaaggacaagcttgagccgtatgcttattggccactcgatcgg
aagatgctgagccgtagaggggaacaaaaggcagttgctcggaagggcatggcgagcgtc
atgaaactcaccaagaaattcgaagggaagagcgccgccaatgctctttccatgaagggg
ttgaagatgagggggaagcaaaagaagggtaacaagaaaataaagtga
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