Magnolia sinica: 131228041
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Entry
131228041 CDS
T09699
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131228041
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
131228041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
131228041
NCBI-ProteinID:
XP_058079859
LinkDB
All DBs
Position
15:complement(57246173..57384977)
Genome browser
AA seq
1605 aa
AA seq
DB search
MDQSQRAPQRASHQYHPSRNAIVDLFNLYLGRNSRQKSEDAIRESPNKTQKRVTALRELP
PRNEQFLLDFEQILGQLPDQEQLCAVTESVLISLIVQCSSHAPQAEFILFSLRSLCSIGY
VNWDTFLPSLLSSVSSAEASIGQGSQAMVAASSTSLQASGIISSSIPIPNSSNFQASNPA
SPLPSIHGIGSPTQSTTEPSSCVSLSPVKSSDISCGGQQISSKANPSLRGTAISYLRQLS
CKIILAALESNLKPATHADIFSHMMNWLVNWDQRQLGIDEADGMKAWKPERALNEWLHSC
LDVIWLLVEEDKCRVPFYELLRSGLQFIDNIPDDEALFTIILEVHRRRDMVAMHMQMLDQ
HLQCPTFATHRFLSQAYPNISGESIANLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWE
RALRCLRHALHTTPSPDWWRRVLLIAPCYRPHNQQLPTPGAVFSSEMICEATIDRAIELL
KMTNSETHCWQEWLIFADVFFFLMKSWCIDFLDFVDKLVSRVDQQILRSNHVTWLLAQII
RIELVTNALNSDPKKVETTRKILSFHKEDKISDPNNVSPQSILLDFISSSQTLRIWSFNT
SIREHLNHEQLQKGKQIDEWWKQVTKGERMMDYMNLDDRSMGMFWVLSYTMAQAACDALM
NCLTSSGVTELLQGSNLQSNDRIMVMRECCPLPMSLLSGLSINLCLKLAHQIEDTLFLGQ
AIPSIAMVETYCRLLLIAPHSLFRPHFTTLTQKTPSILSKPGVSLLLLEILNYRLLPLYR
YHGKSKALMYDVTKIISMIKAKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFT
ETLNRITIISLAITIKTRGIAEVEHMVFLPPLLEQIMATSQHTWSEKTLRHFPALIRDTL
MGRIDKRGQAIQAWQQAETTVINQCTQLLSPSADPTYVMTYISHSFPQHRQYLCAGAWML
MNGHPESINSANLGRVLREFSPEEVTSNIYTMVDVLLHHIQIELQHGHLLQELLLKASAN
LAYFIWTHELLPLDILLLALTDRDDDPHALHIVISLLDRQELQQRVKMFCMNRGPHSHEH
WLNSGLFKRVELQKALGNHLSWKDRYPPFFDDIAARMLPVIPLIIYRLIENDVMEYAEKV
LAIYTPLLAYHPLRFTFVRDILAYFYGHLTGKLIVRILNVLDVSKIPFSESFPQHVGSSN
TVMCPPPDYFATLLLGLVNNVIPPLNSKSKPGSMGDPPSIPGRAALNKTQATSQFGTTNT
SEGQRAFYQNQDPGTYTQLVLETAVIEILSLPVQVSQIVSSLVQIVVHVQTTLIQSSNGL
QGMPSSTGQGSALPTSPSGGSTDSLNTSRSNPSTSGINAASFVSRSGYTCQQLSCLMIQA
CGLLLAQLPPEFHMQLYSEASGIIKSCWWLTDGKRPLRELDSAVGYTLLDPTWAAQDNTS
TAIGNIVALLHSFFSNLPQEWLESTHTIIKNLRPVSSVAMLRIAFRIMGPLLPRLAFSRQ
IFMKTLALLFNVMSDVFGRNSQPSSPNEASEIADIIDFLHHAVLYEGQGGPVQSSSKPKL
ETLTLCSKVMELLRPDVQHLLSHLKTDLNSSIYAATHPKLVQNPT
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagccagcgggccccacagagggcttctcatcagtaccatccgtccagaaac
gccatcgtcgatctcttcaacctctatctagggagaaattcccgccaaaaatccgaagac
gccattcgtgaatctccgaacaaaacacaaaaaagggtaactgctctcagagagcttcct
cctcgcaatgagcaatttcttcttgattttgaacagatcctaggccaattgccagaccaa
gaacagctatgtgctgtgacagaatctgttcttatttctttgattgtgcaatgtagcagt
catgcaccacaagcggaatttattcttttctccttacggagcttgtgcagcataggctac
gtgaattgggacactttccttccttccctcctttcttcggtttcctctgcggaggcctca
attggacaggggagccaagctatggttgctgcatcatctacaagtttacaagcatctgga
ataatttcttcgtcaattccaattcccaattcttctaattttcaagcctccaatcccgca
tcgcctttgccttctattcatggtattggatctcccacccagtccacaaccgagccatca
tcttgtgtatctctctcgccagtcaagtcttccgatatttcctgtggcggacaacagata
tcatcaaaggcaaatccatcactacgaggtacagctataagctatctacgccaactttca
tgcaagattatcttagctgcacttgaatccaatctgaagccagctactcatgccgacatt
ttctcacacatgatgaactggttggttaactgggatcagcggcagttgggaattgatgaa
gctgatggtatgaaggcctggaaacctgagagagctttgaacgaatggctgcatagttgc
ttggatgttatctggctgttggttgaggaggataaatgtcgtgtccccttttatgaattg
cttcgcagtggcttgcagtttatagacaatatacccgatgacgaggctttattcactatc
attctggaggttcatcggaggcgggatatggttgcaatgcacatgcaaatgttagatcag
caccttcagtgccccacattcgcgactcataggttcttgtctcaagcctatccaaatatt
tccggtgaatcaatagcgaacttgcgatactcaccaataacatatcctagtgtactagga
gaacccttgcatggagaggatctggcaacttctattcaaagagggagtttggactgggaa
agggctttgcgttgtctaagacatgctcttcatactactccatcacctgactggtggagg
cgtgtgcttctaattgctccctgttacaggccgcataatcaacaactgccaactcctggt
gctgtgttctcttctgaaatgatttgcgaggcaaccattgatagagctattgagctgctc
aaaatgacaaattcagagacgcactgctggcaggagtggcttatatttgctgatgtgttt
ttctttctcatgaagagctggtgtattgatttccttgattttgtggacaagcttgtatcc
agagttgatcaacagattcttcggagcaatcatgtgacatggctgcttgcgcagataatt
cgcattgagcttgtgacaaatgctttaaattcagatccgaagaaggtggaaactaccaga
aagattctgtcgtttcacaaagaagacaagatctctgatccgaataatgttagtcctcaa
agtattcttcttgacttcataagcagtagtcaaaccttgcgtatctggtcattcaacacc
tcaataagagaacatttgaatcatgagcagcttcagaaaggaaaacagatagatgaatgg
tggaagcaagtaacaaaaggggagcgaatgatggattacatgaatttggatgatagatca
atggggatgttttgggttctttcgtataccatggcacaagctgcttgtgatgcactaatg
aattgcttgacctcttctggagttacagaactgctacaagggtctaatttacaatccaat
gacaggattatggtgatgcgggaatgttgcccactaccaatgtcattactttctggcctt
tcaatcaatttatgtttaaaactggcacatcaaattgaggataccttatttcttggccag
gccattcccagcattgcgatggttgaaacatattgtaggttgctgctgattgcacctcat
tcattgtttcgcccacatttcactacattaacacaaaagactccctccattttgagcaag
cctggggtatccttgctcctgctggaaatactgaactaccgtttacttccactatacagg
taccatggaaaaagcaaggcactaatgtatgatgttacaaaaataatttctatgataaag
gcaaaacgtggagaacatcgcctcttcagattggctgaaaatttatgcatgaatctgatt
ctgtcgctccgggatttttttctggttaaaaaggaattaaagggtccaactgagtttact
gaaacattgaatagaataacaataattagtcttgcgatcaccatcaagacacgtggtatt
gcagaggttgagcacatggttttccttccgccccttctggagcagataatggcaactagt
cagcacacttggtcagaaaagacactccgacacttccctgctcttattcgtgatacttta
atggggcggattgataaaaggggccaggctatccaagcttggcaacaggcagaaacaaca
gtcatcaaccaatgcacacagctcctttcaccatcagctgatccaacttatgttatgacc
tatatcagtcatagttttcctcaacaccgacagtatctatgtgctggcgcttggatgctt
atgaatggacaccctgaaagcattaatagtgcaaatcttggacgcgtcttgagagaattt
tcacctgaagaagtgacatcaaacatttatacaatggtggatgtccttcttcaccatatt
caaattgaactgcaacatggacatctcttacaggaacttctattgaaagctagcgcaaac
cttgcctattttatttggacacatgaattacttcctttggatattttgcttctagcactt
actgacagagacgacgatccccatgctctgcacattgtgataagtctattagacaggcag
gagcttcaacagagagtcaagatgttttgtatgaatcgtgggcctcatagtcatgagcat
tggctcaattctggacttttcaagcgagttgagctgcaaaaagctcttggaaatcatctc
tcttggaaggaccggtacccacccttctttgatgacattgcagcacgtatgcttccagtc
atccctttaatcatttacaggcttattgagaatgatgtgatggaatatgctgaaaaagtt
cttgcaatatacactccattgcttgcctaccacccactgagatttacttttgttcgtgac
atccttgcatatttctacggtcatctgacagggaagctcattgtgcggatattgaatgta
cttgatgtttctaagatccctttctctgagtcatttcctcaacatgttggttcatcaaat
actgttatgtgcccgccaccggactattttgcaactctcttgctgggtctcgtgaataat
gttatacctcctttgaatagcaagtcaaaaccaggatcgatgggagatcctccaagtatt
cctgggcgtgcggcacttaataagactcaagcaacatcacaatttgggacaacaaatact
tcagagggtcagagggcattctatcaaaaccaggatcctggcacgtacacacagcttgtt
ttggaaactgcggtgattgagatcctttcacttcctgtacaggtttcacagattgtgtca
tcacttgttcaaatagttgtgcacgtccagacgacattaatccagtctagcaatgggctt
cagggaatgccgagcagtactgggcaaggttctgcactaccaacttccccatcgggcgga
agcacagactccttaaacacaagcagatcaaacccatcaacatcaggaataaatgcagcc
agttttgtttccagaagcggttatacatgccagcaattatcttgtttgatgatccaggct
tgcggccttctgttggcccaactcccaccagaatttcacatgcaactatattcggaagca
tcagggataattaaaagttgttggtggctcactgatgggaaaaggcctctgagggaacta
gactctgctgttggctatacattgttggatcctacttgggctgctcaagacaacacctca
acagccataggtaatatagttgcacttctgcattcattcttcagtaaccttcctcaagaa
tggctggaatcaacgcacacaattattaagaaccttagaccggtgtcttctgttgcaatg
ttgaggatagcatttcgtatcatgggtccgttgcttcctcggcttgctttttctcgccaa
atctttatgaagaccctagcactgctgttcaatgtcatgtcagacgtgtttgggaggaac
tcgcagccatcatctcctaacgaggcatcggaaatagcagatatcatcgacttcctgcac
catgctgtgttatatgaagggcaaggagggcctgtacagagcagcagtaagcccaaacta
gagacattgactctctgcagcaaagtcatggaacttctacggccggatgtgcagcatctc
ctgtcccatttaaagaccgatctgaattcctccatttatgcagcgactcatccaaagcta
gtccaaaatccaacatga
DBGET
integrated database retrieval system
