KEGG   Magnolia sinica: 131228232
Entry
131228232         CDS       T09699                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
msin  Magnolia sinica
Pathway
msin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131228232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msin03019]
    131228232
Messenger RNA biogenesis [BR:msin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131228232
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     131228232
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 131228232
NCBI-ProteinID: XP_058080105
LinkDB
Position
15:74539119..74550027
AA seq 128 aa
MSWAGAEDIFLSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTRVSAAEIKRAQKAEKDATDLKGSMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggcgggagcggaagatatctttctctctacgtctcttgccagctatcttgat
aagaagcttctcgttttgttacgagatgggagaaagcttttgggggttcttcgttccttc
gatcaatttgcaaatgccgttcttgaaggtgcctgcgagcgagtgatcgttggagatctg
tattgtgatattccccttggtttatatgttattcgtggggagaacgttgtcctaattggc
gagctggacctggaaagggaggagcttccagcgcatatgactcgtgtttcagcagcagag
ataaaaagggcacaaaaagccgagaaggatgcaacagatctgaaaggctcaatgagaaag
aggatggagtttctggatttggattga

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