Magnolia sinica: 131228232
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Entry
131228232 CDS
T09699
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131228232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131228232
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131228232
mRNA degradation factors
5'-3' decay
Lsm complex
131228232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
131228232
NCBI-ProteinID:
XP_058080105
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All DBs
Position
15:74539119..74550027
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AA seq
128 aa
AA seq
DB search
MSWAGAEDIFLSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTRVSAAEIKRAQKAEKDATDLKGSMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggcgggagcggaagatatctttctctctacgtctcttgccagctatcttgat
aagaagcttctcgttttgttacgagatgggagaaagcttttgggggttcttcgttccttc
gatcaatttgcaaatgccgttcttgaaggtgcctgcgagcgagtgatcgttggagatctg
tattgtgatattccccttggtttatatgttattcgtggggagaacgttgtcctaattggc
gagctggacctggaaagggaggagcttccagcgcatatgactcgtgtttcagcagcagag
ataaaaagggcacaaaaagccgagaaggatgcaacagatctgaaaggctcaatgagaaag
aggatggagtttctggatttggattga
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