Magnolia sinica: 131228505
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Entry
131228505 CDS
T09699
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
msin
Magnolia sinica
Pathway
msin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131228505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131228505
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
Pre-60S particles
RNases
131228505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEDDh_C
TPD52
HIP1_clath_bdg
DUF3584
Motif
Other DBs
NCBI-GeneID:
131228505
NCBI-ProteinID:
XP_058080173
LinkDB
All DBs
Position
16:complement(47952217..47993810)
Genome browser
AA seq
483 aa
AA seq
DB search
MDKLDKETLVKIVKLVQKQGMKGAKGGWKEFLDFHDKRFGSSLSDPAKRSIDTLIAFLTT
FTKEEDLEFIAKITKNRERIEELAKSSSDVESPQQRLVRLTIEHPLYGKYYDPITSFNEE
WVVTKLGKVSKAIKSTAMIAVDCEMVLCEDGTEAVVKVCLVDHNLVVKLDKLVNPNKAVA
DYRTEITGISAKDLEGVTSSLIDIQKSLKKLLSHGTILVGHSLHNDLQALKLNHARVIDT
SFIFKYLDETTHSTPSLNNLCKSVLGYEVRRDDAPHNCRDDAVAAMKLVLAKIEHGFDDP
IAVERKHVPETDFRKLFLHRIPIGVPSQELMKIFPPNFTVEVQPNCRVRGRRYSTFAIFK
DSEAACEAFEKIEGKVEKDVHGRPQKLISFQPKKGSTASVYVQKMTSDALLEKPDLLKRR
LAQDEGVQSKKPKVDMLEEDCVKEYQCDHVKEIETLKQELRQKEEEISNLQKILSALTRK
HGL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggataaactagacaaggagactcttgtcaagattgtaaagttggtccaaaaacaagga
atgaagggtgctaaaggaggctggaaggaatttttggatttccatgataagaggtttggt
tctagtttaagtgatcctgcaaagagatctattgataccctgattgcgtttctaacaact
ttcacaaaagaggaagatttagagttcattgccaaaatcacaaagaatcgtgaaagaata
gaagaacttgctaaaagctcctcagatgttgaatcccctcaacaaaggctggtccgttta
actatcgaacaccccctttacggaaaatattatgaccctatcacatcctttaatgaggag
tgggtggttacaaagttaggaaaagtttcaaaggcaataaaatcaactgcaatgatagct
gttgactgtgagatggttctttgtgaagatggtacagaggcagtagtgaaagtttgtctg
gtggatcacaatttggtggttaaactcgacaaacttgtaaaccctaataaagctgttgct
gactacagaactgagattactggaatttctgctaaggatttggaaggagttacctcttct
ttgatagatatacagaaatctttgaagaagctgttgtcacatgggactattttagtaggc
cacagtttacataatgatctacaagcactaaaactaaatcatgcaagagtgattgacacg
tcatttatcttcaaatatctggatgaaactactcacagtacaccttctctgaataatctc
tgcaagtctgtgttggggtatgaagttcgaagagatgatgctcctcataattgtcgagat
gatgcagttgctgcaatgaagttagttctggccaagatagagcatggatttgatgatcct
attgcggttgaaaggaaacatgtacctgaaacagacttcagaaagctttttcttcacaga
ataccaattggtgtgccaagtcaagaattgatgaaaatatttcctccaaattttactgtt
gaagttcagcccaattgtagagttcgaggccgaagatattccacctttgctattttcaag
gattctgaagcagcatgtgaagcatttgaaaaaatagaaggcaaagtagaaaaggatgta
catggccggcctcagaagctcatttctttccaaccaaaaaagggatcaactgccagtgtc
tatgttcagaaaatgacatctgatgctcttctcgagaaacccgacttattaaagaggaga
ttggcccaagacgagggggtgcaatccaaaaagccaaaggtggacatgcttgaggaggac
tgcgtcaaagagtatcagtgtgaccacgtcaaagagatcgaaacactgaaacaagaactg
cgccaaaaggaagaagaaatatctaatttgcaaaaaatcctatccgctcttacaaggaaa
catgggctctga
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