Magnolia sinica: 131228527 Help Entry 131228527         CDS       T09699                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism msin  Magnolia sinica Pathway msin03030   DNA replication msin03410   Base excision repair msin03420   Nucleotide excision repair msin03430   Mismatch repair Brite KEGG Orthology (KO) [BR:msin00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     131228527    03410 Base excision repair     131228527    03420 Nucleotide excision repair     131228527    03430 Mismatch repair     131228527  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:msin03032]     131228527    03400 DNA repair and recombination proteins [BR:msin03400]     131228527 Enzymes [BR:msin01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      131228527     6.5.1.6  DNA ligase (ATP or NAD+)      131228527     6.5.1.7  DNA ligase (ATP, ADP or GTP)      131228527 DNA replication proteins [BR:msin03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     131228527  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      131228527 DNA repair and recombination proteins [BR:msin03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      131228527    NER (nucleotide excision repair)     Other NER factors      131228527    MMR (mismatch excision repair)     Other MMR factors      131228527 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  131228527 NCBI-ProteinID:  XP_058080214 LinkDB All DBs Position 16:49267050..49318240 Genome browser AA seq 755 aa AA seqDB search MLKAPSFHFLLRQLHFSHKPFLTPLAHKPFLTPLSLKPFLTPLSLSMSGRTVSDVLMGAA RAAAQKKPLPPSKKQKTLPEKDPPKPPEPSPPKAGPVAASAPLSKKSSPSVSVDDRIAAL RNKASDFKPSSAAFWKDGDPVPFLFLARALDLIAGESGRIVITEILCNVFRTVIATTPGD LLAVVYLSANKIAPSHEGVELGIGDASLIKALAEAYGRKEEHIKNQLKALGDLGLVAKAS RSSQSLMFKPSPLTVVKVLDTFRVIAKESGKDSQDKKRSHIKGLLVAATDCEPQYLTRLL QSKMRIGLAEQTVLVALGQAAVYSETHSVPPQLQSPLEEAAKIIKRVYSVLPIYDKIVSA LLDVGVWKLSETCSFTPGVPVGPMLAKPTKGVSEILDKFQDMEFTCEYKYDGERAQIHYM EDGSVEIYSRNAERNTGKFPDVVNSVSRVKKSSVRSFVLDCEVVAYDREKQKILPFQILS TRARKGVTLSDIKVEVCIFAFDILYLNSQPLLQKQLKVRREHLYNSFEEVKGEFQFATAI TSNDLEEIQKFLDNAVNTSCEGLIIKTLDGDATYEPSKRSHNWLKLKKDYMDSIGDSLDL VPIAAFHGRGKRTGVYGAFLLACYDEHNEEYQSICKIGTGFSEMVLEERSASLRDKVISK PKPYYRYSDTMSPDVWFEPTEVWEVKAADLSISPVHRAASGTVDPNKGISLRFPRLLRVR EDKSPDQATTSEQVAEMYRAQKINHANNQEDEDDD NT seq 2268 nt NT seq  +upstreamnt  +downstreamnt atgctaaaagctccctccttccatttcctgctgaggcagcttcacttctctcacaaaccc ttccttactcctctcgctcacaaacccttccttactcctctctccctcaaacccttcctc actcctctctctctctccatgtccggccgtaccgtctccgacgtcctcatgggcgccgca cgtgccgctgcccagaaaaaaccccttcccccttccaagaagcagaaaaccctacctgaa aaagacccccccaaacctccagaaccttctcctcccaaggcgggccctgtcgcggcatcg gcgccactgtccaagaaatcttcgccgtctgtgagcgttgatgacaggatcgcggcgctg aggaataaggcttcggatttcaagccctcatctgctgcattctggaaggacggggaccct gttccgttcttgttcctagcccgagcgcttgacctgatcgccggtgagtcgggcaggatc gtcatcacggagatcctgtgcaatgtcttccggacggtgattgccacgacgcctggggat ttgctcgctgtcgtctatctgtcagcgaacaagattgctccttcgcatgagggcgtggag cttggcattggggatgcatcgctgatcaaggcgcttgccgaagcttatggaaggaaagag gagcacataaagaatcagctcaaggcattgggcgatttgggccttgttgcaaaagcaagc cgttcatctcaaagcttgatgttcaaaccttctccattaactgttgtcaaggttttggat acgtttcgtgtcattgccaaggaatctggaaaggacagtcaagacaagaaaaggagccat atcaaaggactgcttgttgcagcaacggattgtgaacctcagtatttaactcgtctgctg cagtctaagatgcggatagggttggcagagcaaactgtcttggtagctctaggacaagct gctgtatattctgaaacacactctgttcctccacaacttcagtctccccttgaagaggct gccaaaatcatcaaacgagtttattcagtacttcccatttatgataaaattgtctcggcc cttcttgatgtgggtgtatggaagctctcggagacatgtagctttacaccaggtgtgcca gttggacctatgttggctaaaccaacaaagggcgtgtcagagatccttgataaattccag gacatggaatttacttgtgaatacaagtatgatggtgagcgtgctcagatacattacatg gaggatggctcagttgagatatacagtagaaatgctgaacgaaatactggaaagttccca gatgttgtcaattcagtttcaagagtcaagaagtcttcagtaaggtccttcgtgctggat tgtgaagttgttgcttatgaccgtgaaaagcagaaaattttgccttttcagatcctcagc actcgtgctcgtaaaggtgtgaccttgagtgatataaaagttgaggtttgcatcttcgcc ttcgatattttgtatctcaatagccagccactactccaaaagcaactcaaagttcgtaga gagcatctttataattcttttgaggaggtaaagggggaatttcagtttgcaacagcaata acatcaaatgatcttgaagaaattcagaaatttcttgacaacgccgttaacactagttgt gagggattgattatcaaaacattggatggggatgctacatatgagccttcgaagcgatca cataattggttgaaactgaagaaagattacatggacagcattggagactcgctagatttg gtaccaattgctgctttccatggtcgtggaaaacgtacaggagtttacggtgcatttctt cttgcttgttatgatgagcacaatgaagaatatcaaagcatatgtaaaataggcactggc ttttctgaaatggtgctggaagagcgttctgccagtcttcgtgacaaagtgatttccaaa ccgaagccatattatcgatattcggatacaatgagtccagatgtatggtttgaaccaacc gaggtttgggaggtgaaagctgcagatttgagtattagtcctgtccatcgtgctgcaagt ggcactgtggacccaaataagggcatttctctccggttcccacgtctgctacgggttaga gaagacaagtctccagatcaggccactacctctgagcaggttgctgagatgtaccgtgct caaaagattaaccatgcaaacaatcaagaggatgaggatgatgactga

DBGET integrated database retrieval system