Magnolia sinica: 131228591
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Entry
131228591 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131228591 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131228591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131228591
Spliceosome [BR:
msin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
131228591
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
131228591
NCBI-ProteinID:
XP_058080337
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Position
16:complement(2271348..2293570)
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AA seq
577 aa
AA seq
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MVDLLQQNGRVDPSELDGGILSNAEESRMTKRQREEGEEDRESNERQKLIRRSSSPTENS
LLPLASYDDDDDDDEEEDRRRRGENGDHKKYEEHEEEDDEEDGLVGQGSHNGRRQRQVEV
RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRNSHAYTHSLEAGH
HVYINLRTEKVYCLPDGYEINDPSLDDIRHVLYPRFNREQVAQLDINKQWSRALDGSDYL
PGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQNCKSPLVHRFGELTRKIWHAR
NFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKSSAKSNRNIIHQC
FQGELEVVKEIHNRAVTEKKDNEQNKASVAEGGTERSHVVTETSRMPFLMLGLDLPPPPL
FKDQMEKNIIPQVPLFNILKKFDGESITEVVRPCIARMRYRVTRLPQYIILHMRRFTKNN
FFVEKNPTLVNFPVKNLELKDYIPLPTPKENERLRTKYDLIANIVHDGKPGEGFYRVFVQ
RKSEELWYEMQDLHVAETLPQMVALSEAYMQIYEQQQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcttctccaacagaacggtcgagtcgatccatccgaattggacggtgggatt
ttgtcgaatgcggaggagagtagaatgacgaaaaggcagagagaagaaggagaggaagat
agagagtcgaacgagcggcagaagctgattcgtcggtcgtcttctcctactgagaattct
cttcttccgcttgcttcttatgatgatgatgatgatgatgatgaagaagaggatagaaga
aggagaggagagaatggggaccataagaaatatgaggagcatgaggaagaggatgatgag
gaagatggattggttggacagggatcacataatgggaggcggcagcggcaggtggaagtt
cgaagggattgtccgtatttggatactgtcaatcgtcaggtattggactttgattttgag
aagttctgttctgtctctctatctaatttgaatgtatatgcatgcttggtctgtgggaag
tacttccaaggtagaggccggaattctcatgcatatactcatagtcttgaagcaggccac
catgtgtacatcaatcttcgaacagaaaaagtttattgccttcctgatggatatgagatc
aatgatccatcattagatgacattcgacatgttctctacccaaggtttaatagggaacag
gtggcgcagcttgatataaataagcaatggtcgagggctcttgatggttctgattatctc
cccggaatggttggtctcaataatattaaggagacggactttgtaaatgttacaattcaa
tctctaatgcgagttacacctctaaggaacttctttcttattcccgaaaactatcagaac
tgcaagtctcctctagttcatcggtttggagagctcacacggaaaatttggcatgcacga
aacttcaagggacaggtgagccctcatgagtttctgcaggcagttatgaaggccagtaaa
aaacggttccgaataggtgcgcagtcggatccagttgagttcatgtcctggctgcttaat
acgctgcatgcggatcttaagagttcagcgaaaagcaataggaacatcattcatcagtgc
tttcagggggaattggaggttgtgaaagagatccacaacagagctgtcactgagaagaaa
gacaatgagcagaataaggcatctgttgctgaaggtggaacggaacgtagccatgttgtc
acggaaacaagcaggatgccgttcttgatgctcgggcttgatttgccaccacctccactt
ttcaaagatcaaatggagaagaatataattccacaggtcccactttttaacatactaaag
aaatttgacggtgaatccatcacagaagttgttcggccttgtatagctaggatgagatac
cgagtcaccagactaccgcagtatataattctccacatgcgcaggtttacaaagaacaat
ttcttcgtggaaaagaatcccactctagttaactttcctgttaagaaccttgaattgaag
gactatattccgttgcccactccaaaggagaatgaaaggctgcggacaaagtacgatctg
attgcaaatattgtccatgatggcaagcctggtgaaggattctacagagtatttgtgcag
cggaaatcagaggaattatggtatgaaatgcaggacctgcatgtcgccgaaactcttcct
cagatggttgctttatccgaggcttacatgcagatatatgagcagcaacagtga
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