Magnolia sinica: 131228707
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Entry
131228707 CDS
T09699
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131228707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131228707
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131228707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
TFIIA
RRM_PARP14_1
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
131228707
NCBI-ProteinID:
XP_058080538
LinkDB
All DBs
Position
16:62933795..62935648
Genome browser
AA seq
422 aa
AA seq
DB search
MDSDQAKLFVGGISWETNEESLKEHFGKYGVVLESVIMRDRSTGNARGFGFVLFSDPSAA
DRALQEPKHVILGRTVEVKKAVPRGEQNHPQQQQQPQQQPQQQQQQQHPQQSRGPVCKNS
SSGGASGNNSGNQFKNRKIFVGGLSANITEEDFRAYFEKYGRITDVVVMYDTVTHRPRGF
GFITFDSDEAVESVLQKSFHELNDKRVEVKLAVPKDGSNGNSSNGGNSYNMRGGGGGRGS
VFGSYPGGVFTQYPRYGLYHGYLPPPVSGYGNAAGYPFPGYPPMGAYDGVGYGAAPIMPP
RSPWSSMGMYGARRSPTPYGNAAPYPGYVNGGVGGFMGMTGSAYRGVVGAANGKWNQGGA
EAQTTAGAGYGGVPGTTPTRTDGGNLDDDASGFGGSYGAGAGNKQNQRGHDGQYRPYPNR
VG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaccaggcgaagctctttgtgggaggaatctcatgggaaacgaatgaagag
tcgctcaaagagcatttcggtaaatatggggttgtactagaatctgtgatcatgcgggac
aggagcacaggcaatgctagaggctttggttttgttctcttctcagacccttctgccgct
gacagagccctccaagaacccaagcatgtcatcctcggaagaacagtagaagtgaaaaag
gcagtcccaagaggtgaacaaaaccacccacaacaacaacaacaaccacaacaacaacca
caacagcaacaacaacaacaacacccacaacagagtagggggcctgtgtgtaaaaatagt
agtagtgggggtgctagtggtaataacagtggtaatcagtttaagaataggaagattttt
gttgggggtttgtctgctaatataactgaggaggatttcagggcttactttgagaagtat
ggtaggatcactgacgtcgtggtcatgtatgacaccgtgacacaccggccgcgtgggttt
gggttcatcaccttcgattcagatgaggcggttgaaagcgtgttgcagaagagtttccat
gaactaaatgataagcgtgtggaggtcaagcttgctgtgccaaaagatggtagcaatggg
aatagcagtaatggtggcaatagttataatatgagaggtggcggcggtggaagaggttct
gtttttgggagctacccgggtggggtttttacgcaatatcctaggtatgggctttatcac
ggttatctgccgccgcctgtttcgggttatggcaatgcagccggctacccttttcctggt
tatcccccgatgggcgcatatgatggagtgggttatggagctgctccgatcatgccgccg
aggagcccttggtctagcatgggaatgtatggagcaaggaggagcccgacgccttatggg
aatgctgccccctacccgggttatgtcaacgggggtgttggtgggttcatggggatgacc
ggcagtgcttatcgtggggtcgttggtgctgccaatggaaagtggaatcagggtggtgcg
gaagcgcagacgacagctggtgctggctatggtggtgtgccaggtacaacgccaacacgg
acggatggtgggaatttggatgatgacgcgtctggttttggcgggagctatggagctgga
gctggtaataagcagaatcagagaggacatgacggtcagtataggccttacccaaatcgc
gttggctga
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