Magnolia sinica: 131229064
Help
Entry
131229064 CDS
T09699
Name
(RefSeq) crossover junction endonuclease EME1B isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
msin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131229064
03460 Fanconi anemia pathway
131229064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131229064
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131229064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
131229064
NCBI-ProteinID:
XP_058080906
LinkDB
All DBs
Position
16:27472634..27575945
Genome browser
AA seq
621 aa
AA seq
DB search
MRAPKSPAGAAFFKALKPRLQTTNLSHLPSLLLMAEPLAVEIPSDDEDVSCPSQLQKKKR
KNSIRTPLLILDDDDSTPSKPTPSFSPSFVPETPFSNPFQEDASIVKCTASDPRTRLASA
KKFSGFAGLICLESDNEFECHSPCQSSKENETRISNFGRAEHSKKSVMESSSIPESAEGN
NTGLCFPTEGVLAGPSSTHSPRRTTNIIQIVGDSPRCSDHSSEDAVPQVHYDHNKENAIL
EQVGDAIKQKDKRVAVNAEKKRRRDEEVARKQQLKEERKLKREQEKLQKETLKAEAAEMR
KLQKEKEKWEKGKFAVKSVVAEIDTKVVEIGSIGVLHSSGHLLSRLAEKGLTFRVTSNPI
ESSILWKMSVPDQISQLTLKGSEVPYVLLVYEAEEFCNLILNESLIDHVRKVQRQFPSYT
ICYVTNRLMAYINKREQVQYKNPMSVNGWRRPPVEEVLSKLTTHFESVHSRQCIDEAELA
EHVVGLTCSLATCQFRKKLTRLSVNANGSLIPKDFIDKHLIKKSVWLKALIAIPKVQPRF
AIAIWKKYPTMRSLLNAYMDPSKSVHEKEFLLKDLMTEGPLGREDRRVGEVCSKRVYRIL
MAQNGNMKTDDVEDGADFFGC
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgcccaaatctcccgcgggagctgcatttttcaaagctctgaaaccgagactg
caaacaactaacttatcgcatctgccatctctccttcttatggctgagccgctcgctgta
gaaatcccttcagatgacgaagacgtttcatgtccctcgcaattacagaagaagaagagg
aagaattccataagaacgcctcttctcattctcgatgacgatgattccactccctccaaa
cccactccatccttcagcccttctttcgtccccgaaactcctttttccaatccgttccaa
gaagatgcttccatcgtcaaatgcactgcttctgatccaagaacccgtctagcatcggcc
aagaaattctctggatttgctggtttaatatgtttggagtctgataatgagtttgaatgt
cattctccatgtcaaagttcaaaggaaaatgaaactaggatctctaattttggtcgggca
gagcactcaaaaaagagtgtcatggaatcaagttccattcctgaaagtgctgaaggcaac
aatactggattgtgtttccctacagaaggggtcttggcaggtccgagtagcacccattcc
ccgcgaagaaccaccaacatcatccagattgttggagacagcccgaggtgcagtgaccac
tcttctgaagatgctgttcctcaggtacattatgatcataacaaggaaaatgccatattg
gagcaagtaggtgatgccataaagcagaaagataagagggtggcagttaatgcagagaag
aaaagacgcagggatgaggaagtggcaagaaaacaacaattgaaagaagaaaggaaattg
aagcgggagcaagagaagttgcaaaaagaaactttaaaggctgaagcagctgagatgaga
aaattacagaaggaaaaggaaaagtgggaaaaggggaagtttgcagtaaaatctgtagtt
gctgagattgatactaaagtagttgaaataggatcgataggagttttacattcttcagga
catctactttctaggcttgctgaaaagggactcactttccgtgtaacttcaaatcctatt
gaaagttcaattttgtggaaaatgagtgttcccgaccaaatttctcagcttactttgaag
ggatcagaagttccatatgtattgcttgtatatgaggcagaagagttctgtaatctcatc
cttaatgaatctctcatagatcatgttcgtaaagttcaacgtcagtttccatcttacact
atttgttacgtcacaaataggttaatggcctatataaataaaagggagcaagtgcagtac
aaaaacccaatgagtgttaatggttggaggcgtccaccggttgaggaggtgctgtcaaag
ttaaccactcattttgagagtgtacattcaaggcaatgcatagatgaagctgaattagct
gagcatgtagttggattaacttgtagcctagccacttgccaatttaggaagaagctgaca
cgcttatctgtaaatgctaatggatcccttattccaaaggatttcattgacaagcatcta
ataaaaaagagtgtgtggttgaaagcattaattgccatcccaaaagtgcaaccgagattc
gccattgccatctggaagaaatatccgaccatgagatcccttttaaatgcatatatggac
ccaagcaaatcagtgcatgagaaagaattcctgctcaaggacttgatgactgaggggccg
ctaggtagggaggataggcgagtgggtgaagtctgttccaagagagtgtacagaatactc
atggctcagaacggaaacatgaaaactgatgatgttgaggatggggcggacttctttggc
tgctaa
DBGET
integrated database retrieval system
