Magnolia sinica: 131229212
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Entry
131229212 CDS
T09699
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131229212
03036 Chromosome and associated proteins [BR:
msin03036
]
131229212
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131229212
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131229212
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131229212
microRNA pathway
RISC loading complex
131229212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
131229212
NCBI-ProteinID:
XP_058081084
LinkDB
All DBs
Position
16:complement(705733..725897)
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AA seq
903 aa
AA seq
DB search
MASSKEEAEECLPPPFPTVPPNTVPKHADPANRRVMARAGFGRDGRPISLLTNHFNVRFS
SPDGIFFHYSVSITSDDNKVVEGKGIGRRVMDKVYQTYSSELEGKQFAYDGEKSLFTVGP
LPQNNFEFMVVLEEASARRGGGNGSPGLNGSPGEGDRKRSKRVQHTRTFKVEISFAAKIP
MKSIALALKGNVEENTQDALRVLDIILRQIAAKRGCLLVRQSFFHDDVRNFTELGGGVTG
CRGFHSSFRTTQGGLSLNMDVSTTMILTPGPVIDFLTTNQNLRDYRQIDWAKAQKMLKNM
RVKARHNSMEFKIRGLSEMPCNQQLFSLKMRNGDGADGDGQTTEITVYDYFLKKGIELSS
SAYMPCLDVGKPKRPNYLPLELCTLVSLQRYTKALSTMQRSSLVEKSRQKPQERIRVVTD
ALRNNRYDEDVLLSACGISIDKQLTPVDGRVLNAPTLKVGNSEDCVPRNGRWNFNNKRLL
APARIDKWAVVNFSARCDISHLSRDLISCGRSKGIHIERPFTLIDEDPQSRRASPIARVE
RMFEQIRARLPGPPQFLLCVLPERKNSDIYGPWKKKNLHEMGIVTQCLAPTKINDQYLTN
LLLKINSKLGGTNSLLAIEHSPCIPLINQTPTMILGMDVSHGSPGQSDIPSIAAVVGSRA
WPLISRYRASVRTQSPKVEMIDSLFKPLANGQDDGIIRELLLDFYQTSNHRKPSQIVIFR
DGVSESQFNQVLNIELDQIIKAFEHLGENWLPKFTVIVAQKNHHTKLFQAGAPDNVPPGT
VVDSKVVHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQKLVLSLSYVYQRST
TAISIVAPISYAHLAAQQMLQFIKFEDFSDASSGHGGVTTAGTVPVPELPRLHQNVCSSM
FFC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcgaaggaagaagcagaggaatgtttaccaccaccctttccaaccgtccct
ccgaacacagtccccaagcatgcagatcctgcaaaccgcagggtgatggctagggctggt
tttggaagagatgggcgacccatctctttgcttactaaccacttcaatgttcgttttagt
tctccagatgggattttcttccattacagtgtctctattacctccgatgacaacaaagtt
gttgaaggcaagggtatcggcagaagagtcatggataaggtttaccagacttacagttct
gagctcgaaggcaaacaatttgcctatgatggagagaaaagcttgtttacagtaggtcct
ctgccccaaaacaactttgagttcatggtggtgctggaggaagcatctgcaagacggggt
ggtggtaatgggagccctggtctgaatgggagccctggtgagggtgacaggaaaagatca
aagcgtgtccagcatactaggacattcaaagtggagataagttttgcagctaaaattccc
atgaagtcgattgccttagctttaaagggaaatgttgaggagaacactcaagatgcatta
agggtgctggatattatattgaggcagattgcagctaagcgtggatgccttctcgtaagg
caatcattttttcatgatgacgtgaggaacttcaccgaattgggaggtggtgtaactggt
tgtcgagggtttcactctagtttccgcaccacccaaggtggtttgtcattgaatatggat
gtctcgactacgatgatcctgacccctggtccagttatagactttttaactaccaaccag
aatctcagggattaccgccagattgactgggccaaggcccagaagatgttgaagaacatg
agggttaaggctagacataatagtatggagttcaagatcagaggattaagtgagatgccg
tgcaatcagcagctattttccttgaaaatgagaaatggagatggtgctgatggtgatggc
cagactacagagattactgtctatgattattttcttaagaagggtatagaattgagtagt
tctgcttatatgccatgccttgatgttggcaaaccaaagcgcccgaattatcttcctcta
gagctatgtacgcttgtttctctgcaacgctatacgaaggctttatccaccatgcaaaga
tcttctttagtggaaaagtcgaggcagaagcctcaggaacgaataagggttgtgactgat
gctttgagaaacaacagatatgatgaggatgtgctgctttctgcttgcggtatttctatt
gacaaacaacttactccagtggatggccgtgttcttaatgcaccaacattgaaggttggt
aacagtgaagactgcgtccctcgcaatgggcggtggaatttcaacaataagagactattg
gcgcctgcacggattgataagtgggctgttgtgaatttttctgcccgttgtgatataagc
catctttcccgtgatcttattagctgtggaagaagtaaaggaattcatatcgagcgccca
tttacgttgattgatgaagatccccagtcaaggagagctagtccaatagcaagagttgaa
aggatgtttgaacagataagggcaaggcttccaggccctcctcaatttcttctatgcgtc
ttgccggaaagaaagaattcagatatttatgggccatggaaaaagaaaaaccttcatgaa
atgggaatagtgacacaatgtcttgcccctacgaagatcaacgaccaatatctgacaaat
cttcttttgaaaatcaattctaagcttggtggtacaaactccttattggctatagagcat
tctccgtgtatccccctaataaaccaaactcctaccatgattttaggcatggatgtgtct
catggttcgccgggccaatctgatatcccatccatagctgcggtagttggctccagagct
tggccattgatttcacgatatagagcatctgtaagaacacaatctcctaaagtggaaatg
atagattctctattcaagccactggcaaatggacaggatgatggcattattagggagctc
ttgctggacttctatcagaccagtaatcatagaaagccttcgcagatcgttatttttagg
gatggagtaagcgagtcccagttcaatcaagtcctgaacattgaacttgaccagatcatc
aaggcatttgaacatttgggggagaactggcttccaaaattcactgtgattgtcgcccag
aagaaccaccacactaagctcttccaggctggtgcccctgataacgttccacctggaacc
gtggtagactcaaaggtggtccatcccagaaactacgatttctacatgtgtgcacatgct
ggaatgatcggcacatcgaggccgacacattaccatgttttgcttgatgagattggcttc
tcacctgacgacctgcagaagcttgtcctttccctttcgtatgtgtaccagaggagcact
accgcaatatcgattgttgcaccgatcagttatgcacacctggctgcacaacagatgctg
cagtttatcaagtttgaggacttttcagatgcatcatcgggccatggaggggtaaccaca
gcggggactgtacctgttccggagctcccgaggctgcatcagaatgtctgcagttcaatg
tttttctgctga
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