Magnolia sinica: 131229304
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Entry
131229304 CDS
T09699
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131229304
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131229304
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
131229304
NCBI-ProteinID:
XP_058081196
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Position
16:66491399..66568471
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AA seq
703 aa
AA seq
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MFSCFRCASKQKRKGKTERIIPDSRLTSRPDRNIGSCSRPMSALGVHLQIQDKYVVIDNG
ILRVTLSKPDGIVTGIRYNGVDNLLEVRNKEVNRGYWDVYWSEPGGPGIFDVIKGTSFKV
IREDENQVEVSFTRTWDPSLKGVLIPLNIDKRFIVLRGSSGFYSYAIYEHLQGWPDFKLS
ETRIAFKLRKDKFHYMAISDDRQRIMPMPDDRESPQGQPLAYIEPVHLINPIHPDLRGEV
DDKYQYSCENKDIKVHGWICFDPPVGFWNITPSDEFRTGGPLKQNLTSHVGPTTLSVFLS
GHYSGEDLVPKFTNGEPWKKVFGLVFMYVNSGPAGTDPLSLWEDAKLQTAFEVESWPYNF
PVSEDFPNSDQRGSISGRLLVIDRYGFSSFVTISMDQNKFMFLSEDYISADSAYVGLALP
GAVGSWQRECKGYQFWTRADSDGFFSINHIRTGDYNLYAWVPGFIGDYRNDEIITITEGC
DIVLGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPMYVNKLYINHPDKFRQYGLWER
YADLYPNNDLVYTVGVSDYRKDWFYAQVTRKKDDKSYQATTWQIKFTLDTVAQSGTYKLR
LAIASATLSELQVRFNDPKANRPHFTTGLFGRDNSIARHGIHGLYWLFNVNIPSCLLVGG
GNTIFLTQPRSASPFQGILYDYIRLEGPADPDSNKEKSSRILY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgtttccgatgtgcgtctaaacaaaaaagaaaaggaaaaactgagagaatc
attcccgactctcgattgacctcaaggccagatcgcaacatcggcagctgttcaagaccc
atgtcggctcttggggtgcatttgcagattcaagacaaatacgtggtgatcgataatggc
atccttcgagtaacattgtcaaagccggatgggattgtgactggcatacgatacaacggt
gttgataatttgctagaagttcgtaataaagaagttaacagaggctattgggatgtctac
tggagtgagcctggaggcccagggatctttgatgtgataaaggggactagttttaaggtg
atacgtgaagatgaaaaccaggtggaagtctcctttacaaggacatgggacccatccctc
aaaggggtccttattcccctcaacattgacaaaaggtttatagtgcttcgtgggtcctcc
ggtttctactcatacgccatttatgagcacttgcaagggtggcctgatttcaagctcagt
gaaactcggatagctttcaagcttcgaaaggacaagtttcactacatggccatatcagac
gatagacaaagaatcatgcccatgccagatgatcgtgaatccccacaaggccaaccgtta
gcatacatagaacccgttcatttgataaatccaatccatccagaccttcgaggagaggtg
gatgacaagtatcagtactcgtgtgagaataaggacatcaaggtacacggttggatatgt
tttgatcctcctgtgggcttctggaacatcacaccaagtgatgagttcagaactggtggg
cctctcaagcagaacctgacctcccatgtgggccccactaccctatctgtgtttctgagc
gggcactactcaggggaagatctagtaccgaaattcaccaatggagagccatggaagaaa
gtgtttggcctggtttttatgtacgttaattcggggccggccggaaccgatccgctttca
ctctgggaggatgcaaaattacagacggcatttgaagttgaaagctggccgtacaatttc
ccagtttcagaggatttccctaactctgaccaacggggctccatcagtggtagattacta
gttattgatcggtatggattttcgtcctttgtcacaatcagcatggatcaaaataaattt
atgttccttagtgaggattatatatctgcagactctgcctatgtgggcctcgctttacct
ggagccgttggatcatggcaaagagaatgcaagggctatcagttttggactagagctgac
tcggatgggtttttctccatcaaccacatccggactggagactacaatctgtatgcatgg
gtgcctggttttataggagattacagaaatgatgagataattaccatcaccgaaggatgt
gatattgtcttgggtgatctggtatatgaaccaccaagagatggtcccacattgtgggag
atcggtatccctgatcgttctgcggccgagttctacgttcctgatcctaatcctatgtat
gttaacaaactctatattaatcatcctgacaagtttaggcagtatggtttatgggagagg
tatgctgatttatatcccaacaatgatcttgtctacactgttggtgtaagtgattatcga
aaagattggttctatgcacaggtcactaggaagaaagatgataaatcataccaagcaacc
acatggcaaataaaattcacactcgacactgtcgcccaaagcgggacctataaattgcga
ttggcgattgcatcggctacactatctgaattgcaagttcgattcaatgacccaaaagcc
aatcggcctcactttacaactggactatttggcagggacaactcgatcgccagacatggg
attcatgggctctactggctgttcaatgtcaacataccgagctgcctgcttgtgggggga
ggcaatacaatctttcttactcagccgagaagtgcgagtcccttccaagggatcctgtac
gattacatccgattagaagggcctgctgatcctgattcgaacaaggaaaaatcatctcgc
attttgtactag
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