Magnolia sinica: 131229305
Help
Entry
131229305 CDS
T09699
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131229305
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131229305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
131229305
NCBI-ProteinID:
XP_058081207
LinkDB
All DBs
Position
16:66588566..66607245
Genome browser
AA seq
669 aa
AA seq
DB search
MYSGFLSLNKMVMDLITFIHSYVTIIPMDKKVVIDNGILQVTLSKPDGIVTGIRYNGIDN
LLEVRNEEVNRGYWDVYWNEPGGPGIFDVIKGTSFKVILEDENQVEVSFTRTWDPSLKGT
LIPLNIDKSFRFIVLRGSSGFYSYAIYEHLQGWPDFSLGETRIAFKLRKDKFHYMAISDD
RQRIMPMPEDRDPPRGQPLAFKEAVRLINPINPDLQGEVDDKYEYSCENKDNKVHGWICF
DPPVGFWQITPSDEFRTGGPHKQNLTSHVGPTTLAMFLSGHYSGEDLTPKFTKGEPWKKV
FGPVFMYVNSYDNSGWAGTDPLALWEDAKLQMLIEVESWPYSFPISEDFPNSERRGSVSG
RLLVKDRFLSEDYISADSAYVGLALPGAVGSWQRECKGYQFWIRADSDGFFSINDIRIGD
YNLYAWVPGFIGDYRNDGTITITEGCDIDLGDLVYQPPRDGPTLWEIGVPDRSAAEFYVP
DPNPIYVNKLYINHPDKFRQYGLWERYADLYPNGDLVYTVGVSDYQKDWFYAQVTRKKDD
KSYQATTWQIKFTLDAVIQSGTYKLRLAIASATVSELLVRFNDPKANPPHFTTGLIGKDN
SIARHGIHGLYWLFNIDVPSAVLVGGENTIFLTQARSVSPFQGIMYDYIRLEGAADPNSN
KKKSSCLLF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagggttcctatccttgaataagatggtgatggacctcatcacgttcattcat
tcctatgtcacaatcataccaatggataagaaagtggtgatcgataatggcatactccaa
gtaactttgtcaaagccggatgggattgtgactggcatacgatacaacggcatcgataat
ttgctagaagttcgtaatgaagaagttaatagaggttattgggatgtctactggaatgaa
cctggaggcccagggatctttgatgtgataaaggggactagttttaaggtgatactagaa
gatgaaaatcaggtggaagtctcctttacaaggacatgggacccatccctcaaagggacc
cttattcccctcaacattgacaaaagtttcaggtttatagtgcttcgcggttcatctggt
ttctactcatacgccatttatgagcacttacaaggctggcctgatttcagtctcggtgaa
actcggatagctttcaagcttcgaaaggacaagtttcactacatggccatatcggacgat
agacagagaatcatgcccatgccagaagatcgtgatcccccacgtggccaaccgttagca
ttcaaagaagccgttcgtttgataaatccaatcaatccagaccttcaaggagaggtggat
gacaagtacgaatactcgtgcgagaacaaggacaacaaggtccacggttggatatgcttc
gatcctcctgtgggcttctggcagatcactccaagtgatgagttcagaactggtgggcct
cacaagcagaacctgacttcccatgtgggccctaccacactagctatgtttctgagcggt
cattattcaggggaagatctaacgccgaaattcacaaaaggagagccatggaagaaagtg
ttcggccctgtttttatgtacgttaattcgtacgataattcggggtgggccggaaccgat
ccgcttgcactctgggaggatgcaaaattacagatgctaattgaagttgaaagctggcca
tacagtttcccaatttcagaggatttccctaactctgaacgacgtggttctgtcagtggt
agattacttgttaaggatcggtttcttagcgaagattatatatcagcagactctgcctat
gtgggcctcgctttgcctggagccgttggatcatggcaaagagaatgcaagggctaccag
ttttggattagagctgactcagatgggtttttctccatcaacgacatccggattggagac
tataatctctatgcatgggtgcccggttttataggagattacagaaatgatgggaccatt
accatcactgaaggatgtgatattgacttgggtgatctggtatatcaaccaccaagagat
ggtcccacattgtgggagattggtgtccctgatcgttccgcggctgagttctatgtcccc
gatcctaatcctatatatgttaacaagctctacattaatcatcctgataagtttaggcag
tatggtttgtgggagaggtatgctgatttatatcccaacggagatcttgtctacaccgtc
ggtgttagtgattatcaaaaagattggttctatgcacaggtcactaggaagaaagacgat
aaatcataccaagcaaccacatggcagataaaattcacactcgacgctgtcatccaaagc
gggacttataaattgcgattggcgattgcatcagctacggtctctgaattgctagttcga
ttcaatgatccaaaagccaatccacctcactttacaactgggctaattggcaaggacaac
tcgatcgccagacatgggattcatgggctctactggttgttcaacatcgatgtaccaagt
gctgtgcttgtgggaggagagaatacgatctttctcactcaggcgagaagtgtcagcccc
ttccaagggatcatgtacgattacatccgattagaaggggccgccgatcccaattcgaat
aagaaaaaatcatcttgccttttgttttaa
DBGET
integrated database retrieval system
