Magnolia sinica: 131229308
Help
Entry
131229308 CDS
T09699
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msin
Magnolia sinica
Pathway
msin00900
Terpenoid backbone biosynthesis
msin01100
Metabolic pathways
msin01110
Biosynthesis of secondary metabolites
Module
msin_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
131229308
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msin01006
]
131229308
Enzymes [BR:
msin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
131229308
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
131229308
2.5.1.29 geranylgeranyl diphosphate synthase
131229308
Prenyltransferases [BR:
msin01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
131229308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
131229308
NCBI-ProteinID:
XP_058081213
LinkDB
All DBs
Position
16:complement(72094672..72096001)
Genome browser
AA seq
381 aa
AA seq
DB search
MASWALIPHTCSIFNHASESKFQTCSMFNQRRSRASTPTSHISKVSIFTKRPSPKTSISA
IPLTKEHTKEEEEKDPNYQNTPRSVSGFDFKSYMLQKGNSVNKALDMAVPAQAPEIIYNS
MRYSLLAGGKRIRPLLCIAACELVGGDEAVAMPSACAAEMIHTMSLMHDDLPYMDDDDLR
RGKPTNHKVFGEDVAVLAGDAMLVFAFEHIAASTLGIPSDRIVRAVGELARTIGGDGLAA
GQIVDISSEGMQDVGLDHLELIHLHKTGALLEGSVVMGGILGGGSHEEIEKLRKYAKCIG
LLFQVVDDILDVTKSSDELGKTAGKDLTADKVTYPKLLGLERSKELAEELNQQAKDQLLG
FDSEKAAPLISLADYIAYRQN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttgggctctgattcctcatacatgctcgatctttaaccatgcaagcgaatca
aaattccaaacctgctcgatgtttaatcagcgcagaagcagagcttcaacacctacatcc
catatctccaaagtttcgatttttacaaaaagaccctcccccaaaacctccatttctgca
atcccccttacaaaagaacacacgaaagaagaagaagagaaagacccaaattaccaaaac
accccccggtccgtctcaggctttgattttaagagctacatgctccagaagggcaattct
gtaaataaggccctggacatggcagtaccggcgcaggcgccggagattatctataattcg
atgcggtattcgctcctcgcgggcgggaagcgcatccgtccgctgctctgcattgctgcg
tgcgagcttgtcggcggcgatgaggcggtggcaatgccctcggcctgtgccgctgagatg
atccacaccatgtcattgatgcatgatgatcttccatacatggacgatgatgatctgcgg
cgcgggaagcccaccaatcacaaggtgtttggtgaggatgtcgccgtcctggcgggcgac
gccatgctggttttcgccttcgagcacattgcagcatccacgctgggcatcccatccgat
cgaattgtccgagcagtcggggagctggccaggactattgggggggacggactggcagca
gggcagatcgtcgatatcagctcggaaggaatgcaggatgttggtttggaccatcttgaa
ctcatccacttgcacaagacaggggcgctgctggaagggtcggtcgtgatggggggcatc
ttgggaggtgggtcccatgaagagattgagaaattgaggaaatatgcgaagtgtatcggg
ttgctatttcaggtggtggatgacattcttgatgtcacgaagtcatcagatgaattgggg
aagacagcagggaaggatcttacagctgataaagtcacttatccgaagcttctaggcctt
gagcgatcgaaggagcttgcagaagagctgaatcaacaagcaaaggatcagctgctggga
ttcgattcggagaaggcggcaccgttgatctcgctggcggattatattgcttacagacag
aattag
DBGET
integrated database retrieval system
