KEGG   Magnolia sinica: 131229365
Entry
131229365         CDS       T09699                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
msin  Magnolia sinica
Pathway
msin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131229365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msin03041]
    131229365
Spliceosome [BR:msin03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131229365
 Complex B
    131229365
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 FA_desaturase
Other DBs
NCBI-GeneID: 131229365
NCBI-ProteinID: XP_058081287
LinkDB
Position
16:complement(72526417..72539143)
AA seq 557 aa
MSEYSGRYDGNGDGYNEYGPSPPHRGDDHSDSKSQHGSHGSRERERDSRRSRDREREKDK
DRDRDRDRDRDRDRDRDRHHRDHHRHSSDRRDRGRDDPDYHRSRDYDRHGISYAYRHRDY
ERDREGRHRHRSHSPSRSKSDHRSRSRSRSRSKSKRISGFDMAPPPSALLAGPAAAAAGQ
LTGTMPTIPGMFPNMFPLAPGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVA
TFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVK
VRRPSDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIR
ELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRAN
QGASQPKPEQESVLLQAQQQVALQRLVFQAGALPTKVICLTQVVSADELKDDEEYEDIME
DMRGEGGRFGTLVNIVIPRPNPNGEPAPGVGKVFLEYADTDGAAKARAGLNGRKFGGNHV
VAVFYPENKFSQAEYDG
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgtcagagtacagcggaagatacgacggcaacggtgacggatacaacgagtacggtccg
tctcctccacacagaggcgacgatcacagcgattccaaatcccagcatggttctcatggt
tcccgtgaacgtgaaagagattctcggagaagcagggacagggaaagagaaaaggataag
gacagggacagggacagggatagggatagggatcgggacagagatcgtgatcgtcaccat
agagatcaccacaggcatagcagtgatagaagagaccgggggcgagatgatcctgattat
caccggagtcgagattatgacaggcatgggatttcatatgcttacaggcacagggattat
gaaagagaccgagaggggcgccataggcacaggtctcattctccttcaaggagtaaatct
gatcatagatcaaggtctcggtctcgttcacgatcaaaaagcaagcgaattagtggtttt
gacatggcgccccccccatctgcactattggctggccctgctgctgccgctgcaggtcag
ctgactgggactatgccaaccattcctggaatgtttccaaatatgtttccattagctcct
gggcagtttggagctctccctgtgatgccagtccaggcaatgacccaacaggctactcga
catgctcggcgtgtgtacgtaggaggtctttcccctactgctaacgaacagtctgtagcg
acctttttcagccaggttatgtctgccattggaggaaatactgctggcccaggtgatgca
gttgttaatgtatacataaaccatgaaaagaaatttgcatttgtggagatgagatctgtt
gaagaagccagtaatgcaatggccttggatggcatcatatttgagggggcgcctgtaaag
gtgaggaggcccagtgactacaacccttctcttgctgcagcacttggcccaagccagccc
aaccccaatctgaacctggctgcagttggcttaacgcctggttctgctggtggactcgag
ggacctgatcgcatctttgttggaggactaccatattacttcactgaagcacagattagg
gagctcttggaatcgtttgggcccctcaggggttttgatcttgtcaaggacagagaaaca
ggaaactcgaaaggctatgcattttgtgtttaccaagacctctccgtcacagatattgca
tgtgcagctcttaatggcatcaagatgggagacaagactctcaccgttcggcgtgcaaac
cagggtgcttcccagcctaaaccggaacaggagagtgtgctattacaggctcaacagcag
gtagctttacagaggctcgtgttccaagcaggtgcccttccaacgaaagtcatctgctta
acacaggtggttagtgcagatgagttgaaagatgatgaggaatatgaggatataatggaa
gacatgagaggagaaggcggaagatttggtacattggtgaacattgtcatcccacggcca
aatccaaatggcgaaccagctccaggagttggaaaggtattcttggaatatgcagatact
gatggagctgctaaagcgagggccggactgaacgggaggaaatttggtgggaatcatgta
gttgccgtcttttatccagagaacaagttttctcaagcggaatatgatggctag

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