Magnolia sinica: 131229565
Help
Entry
131229565 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131229565 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131229565
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131229565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
131229565
NCBI-ProteinID:
XP_058081552
LinkDB
All DBs
Position
16:66472570..66489740
Genome browser
AA seq
647 aa
AA seq
DB search
MNNFIWTVVIETMDTQVVINNGILQVTLSKPDGIVTGIRYNGIDNLLEVRNEEFNRGYWD
VYWNEPGGPGIFDVIRGTSFEVILEDENQVEVSFTRTWDPSLKGTLIPLNIDKRFIVLRG
SSGFYSYAIYEHLQGWPDFSLAETRIAFKLRKDKFHYMAISDDRQRIMPMPDDRDPPRGQ
PLAFKEAVRLINPINPDLQGEVDDKYQYSCENKDIKVHGWICSDPPVGFWNITPSDEFRT
GGPLKQNLTSHVGPTTLSVFLSGHYAGEDLTPKFTNGEPWKKVFGPLFIYVNSGFDGTDP
LALWEDAKLQMLIEVESWPYTFPISDDFPNSDQRGSISGRLLVMDRFLSEDNISADCAYV
GLALPGDVGSWQRECKGYQFWSRADSGGFFSINDIRTGDYNLYAWVPGFIGDYRNDGIIT
ITEGCDIDLGDLIYEPPRDGPTLWEIGVPDRSAAEFFVPDPNPMYVNKLYINHPDKFRQY
GLWERYADLYPNEDLVYTVDVSDYQKDWFYAQVTRKKDDKSYQPTTWQIKFTLDAVIQSG
TYKMRLAIASATVSELQVRFNDPKANRPHFTTGLIGRDNSIARHGIHGLYWLFNINVPST
LLVGGDNTIFLTQARSVSPFQGIMYDYIRLEGPAETDSNKKKSCILY
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttcatttggacggtggtgattgaaacaatggatacgcaggtggtgatcaat
aatggcatactccaagtaacattgtcaaagccggacgggattgtcactggcatacgatac
aacggcattgataatttgctagaagttcgtaatgaagaatttaataggggttattgggat
gtctactggaatgagcctggaggtccagggatctttgatgtgataagagggactagtttt
gaggtgatactagaagatgaaaaccaggtggaagtctcctttacaaggacatgggatcca
tctctcaaagggacccttattccccttaacattgacaaaaggtttatagtgcttcgcggg
tcctccggattctactcatacgccatttatgagcacttacaagggtggcctgatttcagt
ctcgctgaaactcggatagctttcaagcttcgaaaggacaagtttcactacatggccata
tcagatgatagacagagaatcatgccaatgccagatgatcgtgatcccccacgtggccag
ccgttagcattcaaagaagccgttcgtttgataaatccaatcaatccagaccttcaagga
gaggtggatgacaagtatcagtactcgtgtgagaacaaggacatcaaggtccacggttgg
atatgctccgatcctcctgtgggattctggaacatcaccccaagtgatgagttcagaact
ggtgggcctctaaagcagaacctgacctcccatgtgggccccaccaccctatccgtgttt
ctgagcgggcactatgcaggggaagatctgacaccgaaattcaccaacggagagccatgg
aagaaagtgttcggcccgctttttatatacgttaactcggggttcgacggaaccgatcca
cttgcactctgggaggatgcaaaattacagatgctgatagaagttgaaagctggccttac
actttcccaatttcagatgatttcccaaactccgaccaacggggctccatcagtggtaga
ttactggtcatggatcggttccttagcgaagataatatatctgcggactgtgcttatgtg
ggccttgctttgcctggagacgtaggatcatggcaaagagaatgcaagggctaccagttt
tggagtagagctgactcaggtgggtttttctccatcaacgacatccggaccggagactat
aatctctatgcatgggtgccaggttttataggagattacagaaacgatgggatcattacc
atcaccgaaggatgtgatattgacctgggtgatctgatatatgaaccacctagagatggt
cccacattgtgggagatcggcgtccctgatcgttctgctgctgagttcttcgttcccgat
cctaatcctatgtatgttaacaaactctacattaatcatcctgacaagtttaggcagtat
ggcttgtgggagaggtatgctgatttatatcccaacgaagatcttgtttacaccgtcgat
gttagtgattatcaaaaagattggttctatgcacaggtcactaggaagaaagatgataaa
tcataccaaccaaccacatggcagataaaattcacacttgatgctgtcatccaaagtggg
acctataaaatgcgattggcgattgcatcagctacagtatctgaattgcaagttcgattc
aatgacccaaaagccaatcgccctcactttacaactggactaattggcagggacaactcg
attgccagacatgggattcatgggctctactggctgttcaacatcaacgtaccaagcacc
ttgcttgtgggaggagacaatacaatctttcttactcaggcgagaagcgtgagccccttc
caagggatcatgtatgattacatccgattggaagggcccgccgaaactgactcgaataag
aaaaaatcttgtattttgtactaa
DBGET
integrated database retrieval system
