Magnolia sinica: 131229820
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Entry
131229820 CDS
T09699
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131229820
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
131229820
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
131229820
NCBI-ProteinID:
XP_058081842
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Position
16:complement(1571779..1573287)
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AA seq
395 aa
AA seq
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MGSKSNLQTACLVFLFAWVAEAIAPAKVFNVKDFGAIVGGKTDNSKALLDAWKEACAWDG
MGRVLIPKGTFLVGPVVFKGPCKGAIVFQVAGVVKAPGLEKFESDGWIEFQYINGLMVTG
GGTFDGQGALAWPHNKCPKMKKCKLLPTSLRFMFVTDATIRSISSVNSKLFHMNIVGCKN
LKLHSINISAPGDSPNTDGIHIGDSSGVTISHSVIGTGDDCISIGPGTSNISISNILCGP
GHGISIGSLGKYPNEGNVVGVNVRNCTITGTTNGLRIKTWQDSSILSASDFTFKDIVMNN
VYNPIIIDQEYCPYASCTQQTPSRVKISDVSFINIRGSSTSQVAVNLLCSKGVPCQNVRL
NNINLVYSGLGGPATSSCSNIKGTSSGSQSPPSCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgaaatcgaatcttcagacagcctgtttggtgttcttatttgcatgggtggcc
gaagccatcgcaccggcgaaagttttcaatgtgaaggatttcggtgcaatcgtcggcggc
aaaacagacaacagcaaggcattgttggatgcgtggaaggaggcatgtgcatgggatggt
atgggtagggttttgattcccaaagggacattccttgtgggtccggttgtattcaaaggg
ccatgcaagggtgctattgtatttcaggtcgctggggtggtgaaggcgcctggtcttgag
aagttcgaatcggacggttggatagagttccaatacataaacggcttgatggtcacagga
ggtgggacattcgacggtcaaggagctttagcttggccacacaataaatgccccaagatg
aagaaatgcaagctcttaccaacgtccctacgattcatgtttgtgacggatgcaacgatt
cgtagcatatcttcggtgaatagcaagctcttccacatgaacattgtggggtgcaagaac
ttgaagctccattctattaacatctccgcacctggggacagccctaacacggacggtatc
cacataggagactcaagtggggtgacgatctcccattcagtaataggcaccggcgacgat
tgcatctctattggccctggcacctccaatatctccatatccaacatcttatgtgggcca
ggacatggtatcagcattggtagccttggaaagtacccgaacgaaggaaatgtggtgggc
gtgaacgtgaggaactgcaccatcacagggaccaccaacggcctaaggatcaagacatgg
caagactcttctatcttgtctgcatccgatttcacattcaaggatatagtcatgaacaat
gtctataatccaatcatcatagatcaagagtattgcccatatgcatcctgcacccaacag
actccttcgcgtgttaagattagcgacgttagcttcataaacattcgtggcagctcgacg
tctcaagttgcggtcaatcttttatgcagcaaaggcgtgccatgtcagaatgtgcggctc
aacaacatcaacctggtctacagtggattggggggacctgccacatcctcatgttctaac
atcaagggaacttcctctggctcacaaagccctccctcttgcctctga
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