Magnolia sinica: 131230242
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Entry
131230242 CDS
T09699
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131230242
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131230242
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
90S particles
Helicases
131230242
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ParD_antitoxin
UTP25_NTPase-like
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
131230242
NCBI-ProteinID:
XP_058082059
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Position
17:27639762..27699866
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AA seq
526 aa
AA seq
DB search
MEKSSSFLFAGIRFDRKKFANDFARLSKKEEKVLPGVETGADELTEKRTVSAGKRRKRKT
NVSESIEGFSVFKSSKPVAAVGKKKEVEDEILQEKKETNRQIEKDAILRKKYGIHISGHG
VPSPLQNFAELRSRYSCKRYLLQNLAGLGFKEPTPIQRQAIPVLLSGRECFACAPTGSGK
TLAFIFPILMKLKPGAMDGIHAVVLCPTRELAAQTTRECKKLAKGKKIYIKLMTKELARC
GDFKKMPCDILVSTPLRLEFAIRKRKLDLSRVEYLILDESDKLFELGFVEQIDSVVKACS
NPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIKQKLIFAGSEEGKLLAL
RQSFAESLNPPILVFVQSKERAKDLYKELAFDNIKADVIHADLTQTQRENAVDSFRAGKT
WVLIATDVIARGMDFKGINCVINYDFPESAAAYIHRIGRSGRAGRSGEALTLYTEDDVPF
LRNIANVMVASGCEVPSWILALPKLRRKKHRPQRDSISIQPTDDGK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcttcctcattcctcttcgcaggcatccgcttcgatcgaaagaagttcgcc
aacgatttcgccagattgagcaaaaaggaggagaaggtattaccgggtgtggaaaccggt
gctgatgaattaacagagaagaggacggtgtcggctggaaagaggagaaagcgaaagaca
aatgtttctgaatcaatagaaggatttagtgttttcaagagttcgaaaccagtggcagca
gttggaaagaaaaaagaggtggaagatgagattttgcaagaaaagaaggaaacaaacagg
cagattgagaaagatgccatcttgcgtaagaagtatgggattcatatttctggacatggt
gttccgtctccactccagaactttgcagagttgcgctcaaggtatagctgtaaacgatat
ttattacaaaatctagcaggactgggctttaaagaaccaactcctatccaaaggcaggct
attccagtcctcctctcaggacgggagtgctttgcttgtgcaccaacaggttctgggaag
accttggcttttattttccccattcttatgaaacttaagcctggagcaatggatggcatt
catgctgtagttctttgccctacaagggaattagctgcacaaacaaccagggaatgcaag
aagttggctaaaggaaagaaaatttacattaaattaatgaccaaggagcttgcaagatgt
ggtgattttaagaaaatgccttgtgacatacttgtgtcgacaccacttcggttagagttt
gctatacgcaaaagaaagcttgatctaagcagggtggaatatctcatcttggatgaatct
gataagctgtttgagcttggatttgtggagcaaattgattccgtggtcaaagcatgctcc
aatccttcaataatacgatcattgtttagtgccactttacctgattctgttgaagagctt
gcacgcacaataatgcatgatgcagttcgagtcattgtgggtaggaagaattcagcttca
gaactgataaagcaaaagctgatttttgctggaagtgaagaaggaaagctgcttgcactg
cggcaaagttttgccgagagtctgaacccgcctatacttgtgtttgtccaaagcaaagaa
agagcaaaggatctctacaaggaattagcattcgacaacataaaagcagacgttatccat
gcagatttgactcagacacagcgagaaaatgcagttgatagtttcagggccggaaagacg
tgggttttaattgccacagatgttattgctcggggtatggactttaagggcatcaactgc
gtaataaattatgatttccctgaatcagcagcagcttatattcaccggattggtcggtcg
ggcagagcagggaggagcggggaagctttaacattgtacacggaagatgatgtgccattt
ttacggaatatagccaatgtgatggtggcgtcaggttgtgaggttccttcttggatcctg
gccttgcccaagctccggcgaaagaagcaccggccacagagagattctatttcgatacaa
ccaacagatgatgggaagtga
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