KEGG   Magnolia sinica: 131230327
Entry
131230327         CDS       T09699                                 
Name
(RefSeq) uncharacterized protein LOC131230327 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
msin  Magnolia sinica
Brite
KEGG Orthology (KO) [BR:msin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msin03400]
    131230327
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    131230327
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT
Other DBs
NCBI-GeneID: 131230327
NCBI-ProteinID: XP_058082171
LinkDB
Position
17:20140982..20165866
AA seq 1213 aa
MGFVGGDEEGKKSLEDGETQILALDSDDDSPPPSGEKLKDGGVQFDDTLPLDSNSLFETE
LVEEGADLDGETQVLEDLDCIVHDFHGETQLLEDTDCMTDECEKEVAVDSDAEGTERTEV
LLSDADGVSDDGTTSLKVNGFNGDREMGDRVTQSEKEPYVPPPCAFDKGGKDFVVDSDAS
TDEDCSPARHHVSSASPHVSATGSNPGSARKSFTSVRAESLRSSGLAAALSMTPKGTDVE
PNPTLSNSGSEQKQDNAKVSNPGTDGIKKDDVLNSLSHRTPFIGIEMSERHQDHAAENCH
RTKNARARKLFSESIPAGNVEIINKVDDPTEKSDSFKLLVSSNGTAGLSYVGSQEPGEQS
QANALDIVDKFLSINDVEVSGEVRPGKDLGGKSPHISSAKGAQSLAKRSDLRSPVVKEGI
FDWIDSHEDEGGGEFFSKRKDALLESKRRMRKSHTQPRKPKHAEFKITRDAVDKFGEKEE
GTISQIGRKIIGLTHSDSRLILHGGDGVQFSKAKTKKNLLKELDEQSNAAVSGQPLEKTA
IEGGSPSLYDVGIDTQLAAEAMEALVCGPSADHDLMDVHPVARNSTERSSRSATKNKARS
KHVSVRKRSCSTSDSEETTRKPKQTKSTKFRKGLNPFRKHSKDSSTKSSGKESAVKANSN
GEKRKHEEEHFTNRESPNGNECLSGKSSKSVERGKTRGNVDVTHIKKVDSSASNGHASIE
KGLVQGHGTVTPIASRTRQSKTMNQLKKNRISYNQLPVEDSILGSKRKGSNFVSYPKGKR
TRRNMSDDLNNAANLTGLPIATDAMAEVNAKSSAQQKQSKTDMGNYFVSLDTVKRKARSS
NTPMPPSLLGPCMPSETDQMGSITVMNEEIPPENLTSPTSGVLTCAGQKYGVESARTLVE
DARGNAGLEGSPKGKVQPSQSAFTTPSKDVHAVSPICAGDDRQKQSSKKGLSRSSLAREL
IRLDASEAVQAHLKDMRRRRDMASVSVLFSHHLGEDIIKQQRKKILARLGVSTASSSWDA
THFIADKFVRTRNMLEAVALGKPVVTHLWLESCGQASCFIDERNYILRDTKKEKEIGFSM
PASLARACHSPLLQDKRVFITPNVKPGREVVTSLVKAVHGQAMERIGRSAMKDDKIPDNL
LILSCEEDYTICVPLLEKGAEVYSSELLLNGIVIQKLEYERHRLFTDHVKRTRTTIWLRN
EDGNQFHPVSRHT
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgggttttgttggaggagatgaggaagggaagaaatcgctggaagatggcgaaacccag
attctggctctcgacagtgatgatgattctccgccgccttccggtgagaaactcaaagat
gggggtgtgcaattcgatgatacccttcctcttgatagcaactctttatttgaaaccgaa
ttggtggaagaaggtgctgatctagatggtgaaacccaagttttggaagatctggattgc
attgtgcatgattttcacggtgaaacccaattattagaagatacggattgcatgacagat
gaatgtgagaaagaggttgccgtcgacagtgatgccgaaggaacagagagaactgaggtg
ttgttaagtgatgctgatggggtctctgatgatgggactacttcccttaaagtcaatggc
tttaatggtgacagagagatgggagacagggtgacacaatctgagaaggagccgtatgtt
cctcctccgtgcgcatttgacaaaggtgggaaggattttgtggtggattcggatgcctca
actgatgaagactgtagtccagcgagacatcatgtttcttctgcatcaccacacgtgagt
gcaactggatcaaatcctggatctgcacgaaaaagcttcacatcagttcgtgcggagtcc
ttgcggtcttctggtcttgctgcggctctcagtatgactcccaagggaactgacgttgaa
ccaaatcccactttgagtaatagtggatcagagcaaaagcaagacaatgctaaagtttca
aatcctggtactgatggcataaaaaaggatgatgttctcaacagcttaagtcaccggact
ccttttattggcattgaaatgtctgaacgacatcaggatcatgcggctgagaactgtcat
aggaccaagaatgcaagggcaagaaaactttttagtgaaagtataccggcgggaaacgtg
gaaatcataaacaaggttgatgacccaactgaaaaatctgactcatttaaattgcttgtc
agctcaaatggtactgctgggttaagctatgtcgggtcacaggagccaggtgaacagtca
caagccaatgcgttggacattgtagataaatttctatccatcaacgatgtagaggtatct
ggagaagtgaggcctggcaaagaccttggtgggaaatcgccccacatctcgagtgcaaaa
ggggctcaaagtttggctaaaagatctgatcttagaagtccggtggtcaaggaagggatc
tttgactggattgacagtcatgaggatgagggtgggggagaattcttcagcaaaagaaag
gatgctttgcttgaaagcaaacgccgcatgcggaaatcacatacccaacctcggaaaccc
aagcatgctgaattcaaaataactagagatgcagttgataaattcggagagaaagaagaa
ggcacaatctctcaaatcggtcggaaaataataggtttaactcattcagattcaaggcta
attttgcacggaggtgatggagtacagttttctaaggcaaaaacaaagaagaatctcttg
aaggagctggatgaacagtctaatgcagcggtttcagggcagccattggagaaaactgcc
atcgaaggaggttcacctagtttatatgatgttggtattgatactcaattggctgctgaa
gcaatggaggccttagtttgcgggccatctgctgatcatgatctcatggatgtgcatcct
gtggcaagaaactcaactgaacgttcctccaggagtgcaacaaagaacaaagcccgttca
aagcatgtttctgttaggaagaggtcttgttctacatctgattcagaggaaactacaaga
aaacccaagcaaacaaagagcacaaaatttaggaaaggtcttaatccttttaggaaacac
tcaaaggactcaagcactaagagttcagggaaagaatcggcagtaaaagcaaactcaaac
ggggaaaagcggaagcatgaagaagaacacttcaccaaccgggaatctcccaacggtaat
gaatgcttgagtggaaagtcttctaaatccgtcgagagagggaagacacgaggaaatgtg
gatgtgactcacataaaaaaggtggactcatcagcatcaaatgggcatgcctcgatcgag
aaaggacttgtacaggggcatgggactgttacacctattgcaagccggacgagacaatcg
aaaacaatgaatcaattgaaaaagaacaggatttcatataatcagcttccagtggaggat
agtatccttgggagcaaaagaaaggggagcaatttcgtgagttatcccaaagggaagaga
acacgccgtaatatgtcagatgatttaaacaatgctgccaacttgactggcctacccatt
gcaactgatgctatggcagaagtcaatgcaaaatcatctgcacaacagaaacagtcaaaa
accgatatgggaaattattttgtgagcctagatacagtgaagaggaaagcaagatcatcc
aatacgcccatgccaccatccttgcttgggccatgcatgccttctgaaactgatcagatg
ggttccatcactgtcatgaatgaggaaataccccctgaaaatctgacatcacccacctct
ggtgtactgacatgtgccggtcagaaatatggtgttgagtctgctagaacgcttgttgaa
gatgcaagaggaaatgccggtttagaaggatccccaaagggaaaagtccaaccatctcag
tcagcctttactacaccttcaaaagatgtgcatgcagtatcacctatttgtgcgggtgat
gaccgccaaaagcaatctagcaagaaagggttatcaagatcatctcttgcaagggagctt
attaggttagatgcctccgaagcagtgcaagctcatttgaaggatatgcgaagacgaaga
gatatggctagtgtgagtgttttgtttagtcatcacttgggtgaagatataattaagcag
cagagaaagaagattttggcccggcttggagtctccactgcatcctcttcttgggatgca
acacacttcatagcagataagtttgtgcgtacgaggaacatgttggaagcggtggctctc
ggtaaacctgtggtgacacatttgtggctcgagagctgcgggcaagcaagctgttttatc
gatgagagaaattacatactgagggataccaagaaggagaaggagattggcttcagcatg
cctgcttctttggctcgtgcatgccacagtccgctcttacaggataaaagggtgtttatc
acccctaatgttaaacctggtagagaagttgtcacaagcttagtcaaggcagttcacggc
caggcaatggagagaatagggagatctgcaatgaaggatgataaaattccggacaatctt
ttgatcctttcatgcgaagaagattatacaatctgtgtgcctctccttgaaaaaggtgca
gaggtttatagttcagaacttctactgaatggaatcgtcattcagaaattggagtatgag
aggcatcgacttttcacggatcatgttaagagaacccgaacgacgatatggttaagaaat
gaagacggcaatcagtttcatcctgtaagcagacatacatag

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