Magnolia sinica: 131231228
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Entry
131231228 CDS
T09699
Name
(RefSeq) acyl-CoA-binding domain-containing protein 5-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131231228
Membrane trafficking [BR:
msin04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
131231228
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
DUF702
Motif
Other DBs
NCBI-GeneID:
131231228
NCBI-ProteinID:
XP_058083337
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All DBs
Position
17:4406231..4412299
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AA seq
628 aa
AA seq
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MGSLGCEIVKNKAMWLYPKVMGFNPCERWGHSACSSNGVVYVFGGCCGGLHFSDILMLEF
DAMAWTALVTTGQQPGKRDSHSAVLVGHKMIVLGGTNGSKKVNDLHILDLRTKEWSQPTC
EGVSPSPRESHTATIVGENKLVVFGGSGEGEANYLNDIHVLDLNTMKWTSPEVKGDLPVP
RDSHTAVAIENKLVVYGGDCGDRYHGEVEVLDMGMLTWSKLAVQGPSPGARAGHTAVNIG
TKVYVIGGVGDKHYYNDVWVLDLHTCSWTQLDICCHQPQGRFSHSAAVINSSIVIYGGCG
EDEHPINELLVLQLGANHPNGRHNISLCKIFSNHCNQEKPRYFREMENSIKKNTNMVFGN
GEPNFHAKRRKSVDHKVWAVESEQEEHSLSLSQHSSPTQSDQEQTQTTVCKPSSAASDSI
MVSLPFGLFKQQNQTSNQTEQWNSVGRSDQDFHFMGGEFQRQRKPEQRLHVVHSGRQQVQ
FAPSDQKLPQRSTAPTLIGAEVHGMIDGAFDSGYLMTAKVNGQILRGVLFTPGHSFVTKA
VLPKNPSLASPNAIAQPYLRPTHTCTARVTPQQQATIMLPESGYRVHQDQPLSIIRSTPS
LPKRSMLSSDLQDVVLTLGGSGSCRGGP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggggtctttgggttgtgaaattgtcaaaaacaaagctatgtggttatatccaaaggtt
atgggatttaatccttgtgagagatggggacactcagcttgctcttctaatggcgttgtt
tatgtttttgggggctgttgtggtgggttgcatttcagcgatatcctaatgctcgagttc
gatgcaatggcatggactgcattagtaaccacaggccagcagcctggtaaaagggacagc
cacagtgcagtgcttgtagggcataagatgatagtattagggggtactaatggttctaag
aaggtgaatgatcttcatattttggatcttaggaccaaagaatggagccagcccacttgc
gaaggggtctcaccttcacctcgcgaaagtcacactgctacaatcgtaggcgaaaataaa
cttgtggtatttggtggtagtggagaaggggaggcgaactacttgaatgacatacatgtt
ctagaccttaataccatgaaatggacttctccagaggtgaagggtgatcttccggtgccg
agggatagccacacggctgttgcaatcgagaacaaacttgtcgtatatggtggagattgt
ggagatcgatatcacggcgaggtagaagttcttgacatgggcatgcttacttggtcgaag
ttagcagttcaagggccttcacctggggctagagcaggtcacacagctgtaaatatcggg
accaaggtttacgtcataggtggcgttggggataagcattactacaacgatgtttgggtt
ctggacttgcatacctgttcatggactcagctcgatatatgctgccaccaaccacaaggg
cggttttctcatagtgccgcagttatcaattcgagcattgtcatctatggaggatgtgga
gaagatgagcatcctataaatgaattgcttgtacttcaactaggagccaatcatccgaat
ggccgtcacaacatttccttatgcaagattttcagtaatcactgcaaccaagaaaagcca
agatacttcagagaaatggagaattcaattaagaagaatacaaacatggtatttggaaat
ggagaaccgaattttcatgcaaagaggaggaagtccgtcgatcataaggtgtgggcggtt
gaatcggaacaagaagagcattctctttccctatcacagcattcatctcccacccaatcc
gatcaagaacagacacagacaacggtttgtaagccgtcatctgcagcttccgattcaatc
atggtctctctgccttttggtttgttcaagcagcagaatcagaccagcaaccaaacagag
cagtggaacagcgttggaaggtctgatcaggatttccatttcatgggtggcgagtttcag
agacagcgaaagccagaacagcgtctccatgtggtccactccggaaggcaacaagtgcag
ttcgcaccgtctgatcaaaagcttcctcagagatcaacagctcccacattgattggagct
gaggtccacggcatgatcgatggggcttttgattctgggtacctcatgaccgctaaagtt
aacggacagatactcagaggggtcttattcacacctgggcatagttttgtcacgaaagca
gttcttcccaagaatccatctctagccagtccaaatgctattgcccaaccgtatttgcgg
cccacccacacttgtaccgctcgtgtcacacctcagcaacaggcaacaatcatgctgcca
gaatctggttatcgtgtccatcaagatcaaccgctgtccatcatcagatccacgccgtcc
ttacccaaacgatcaatgcttagtagtgatcttcaagacgttgttctgacattgggtgga
tcgggaagttgtcgtggcgggccataa
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