Magnolia sinica: 131231379
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Entry
131231379 CDS
T09699
Name
(RefSeq) pleiotropic drug resistance protein 3-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
msin
Magnolia sinica
Pathway
msin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131231379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msin02000
]
131231379
Transporters [BR:
msin02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131231379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
AAA_25
AAA_29
AAA
RsgA_GTPase
AAA_16
AAA_18
AAA_30
AAA_22
AAA_33
AAA_28
Rad17
AAA_23
RuvB_N
AAA_14
nSTAND3
AAA_17
NACHT
NTPase_1
ATPase_2
AAA_11
AAA_5
RNA_helicase
AAA_19
Motif
Other DBs
NCBI-GeneID:
131231379
NCBI-ProteinID:
XP_058083528
LinkDB
All DBs
Position
17:complement(2389779..2420016)
Genome browser
AA seq
1213 aa
AA seq
DB search
MVHCPFEQGLARVCGSKSQEAKISIINGVSGVIKPSRMTLLLGPPGCGKTTLLLALAGKL
DKSLKVTGEISYNGYKLEEFVPQKTSAYISQYDLHIPEMTVRETLDFSARCQGVGSRAEL
MMEVSRREKELGIVPESDIDTFMKAISVKGLERTLQTDYILKILGLDICAETMVGDAMRR
GISGGQKKRLTTGEMIVGPTKALFMDEISTGLDSSTTFQIVTCLQQLTHITDATMLVSLL
QPAPESFDLFDDLILMAEGKIVYHGPRCHVLGFFEDCGFKCPERKGTADFLQEVLSSKDQ
EQYWYHTDQPYTYVTVDQFSKKFKECDIGRKLNEELSKPYDKSHSNKTALAFSAFSLTKW
ELFKACMAREWLLMKRNSFVHVFKTAQLVIMAFITMTIFIRTQMRVDVLHANYYMGSLFY
TIIRLVTNGIAELALTVSRLPVFYRQREYYFYPAWTFSIPASILKIPFSLLESFIWTAIT
YYVIGYSPEIERFFCQFLLLFGLHQSSTSMFRFLASVFQTPVAASTSGTLSVLIILLFGG
FILPLPSLPPWLKWGFWLSPITYAEIGISINEFRAPRWQKISSTNSTIGHEVLTSRGLDF
NDYFYWISLGALFGFTILFNIGFTLALTFLKPPSTSKAIISHEKLSQLQGREDYKNRMDI
ARKAAIAPMTIAETKRDGRMVLPFEPLIMVFQNIQYFVDTPPKLREQGFAEKKLQLLHDI
TGVFRPGVLTALMGVSGAGKTTLMDVLSGRKTFGIIEGDIRIGGYPKVQHTFARISGYCE
QNDIHSPQITVEESVIYSAWLRLSPQIDQTTRSEFVKQVLQTIELDGIKDALVGIPGVNG
LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVKNVVDMGRTVVCTIHQP
SIDIFESFDELILMKRGGQMIYSGPLGQHSSKLIEYFEGIPGVPKIKDNYNPATWMLEIT
SMSIETELGLDFSHLYKESSLYRNNEQDLFNILGSMFIAMIFLGVNNCSTIMPFVARERT
VLYREKFAGMYSSRAYSFAQVAIEIPYILLQAILFVSITYPMIGYFWSAYKVFWYFYTTL
CTLLFFNYMGMLLMSLSPNVQVASVLAAPCYTLLNLFSGFLIPGPKIPKWWVWCYWICPT
AWSLNGLLTSQYGDISKEITTFGKLTPVNSFIKDYFGFQHNHLGFVAIALAAFPVIFASL
FTFFIGKLNFQRR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggtccattgcccatttgaacagggtttagcaagagtttgtggttccaaatctcaagaa
gctaagataagcatcatcaacggtgtcagtggcgtaatcaaaccatcaaggatgactcta
ttgctgggcccaccaggatgtgggaagacaacattactattagcacttgctgggaagctg
gacaaatctctaaaggttacaggagaaatctcctacaacggttacaaattagaggagttt
gtacctcagaagacatcagcttacataagccaatatgatctacacattcctgagatgact
gtaagggagacacttgatttttcggcacgttgtcagggcgttggaagcagagcagaactt
atgatggaagttagcagaagggagaaggagttgggaattgtaccggaatcagatatcgac
actttcatgaaggcaatttctgtcaaaggattagagagaaccctccaaacagactatatt
ttaaagatcctaggattggacatctgtgctgaaacaatggttggtgatgcgatgcgaaga
ggcatttcgggtggtcagaagaaaagactcactacaggggagatgattgttggtccaaca
aaagctcttttcatggatgagatatcgactggcttggacagctcgaccacctttcagatt
gtcacttgtcttcagcagttgacgcacatcacagacgctacaatgttggtttcacttctt
caaccggcgccggagtcctttgatctctttgatgatctcatcttgatggcggaagggaaa
attgtgtatcatggcccacgatgtcatgttcttggtttttttgaggattgtggtttcaaa
tgcccggaaagaaaaggcactgctgacttcctccaagaggtactctctagtaaggatcaa
gaacaatactggtaccatacagaccaaccttatacttatgtcacagtagaccaattctct
aagaaatttaaggaatgtgatattggacgaaagctaaatgaggaactttccaagccatat
gataagtcccacagcaacaaaactgctttagcgtttagtgcattctctctaaccaaatgg
gaattattcaaagcttgcatggctagagaatggcttctcatgaaacggaattcattcgtt
catgtattcaaaacagcacagctggtaatcatggcatttataacaatgaccatatttata
cgcacacagatgcgtgtggatgtgttgcatgcaaattactacatgggttctttattttat
acaatcatccgacttgtgacaaatggaattgcagagctggctttaactgtttctagactc
ccagttttctacagacagagagaatattacttctaccctgcatggacattctctattccg
gcttccatcctgaagatccctttttcattgcttgaatcttttatttggacagctattact
tactatgttattgggtatagtcctgagattgaaaggtttttctgccaatttcttctatta
ttcggtctccaccagtcatcaacatccatgtttcgtttccttgcctcggttttccaaacg
ccggttgctgcttcaactagtggaactttgtcagtactaataatcttgttatttggtggc
tttattcttcccctaccctcattaccaccctggttgaagtggggattttggctatctcca
ataacatatgcagagataggcatctcgatcaatgaattccgtgctccacggtggcaaaag
atttcatcgacaaattcaactataggacatgaagttctaacaagccgtggactagacttt
aatgactacttttattggatatcacttggagcattgtttggattcacgatacttttcaat
atcggatttaccttggccttgacttttttaaagcctccaagtacatccaaggctattatt
tctcatgagaaactctctcaactacaaggaagagaagactataagaatagaatggatatt
gctaggaaggctgctattgctcccatgactattgcagaaacgaagagagacgggagaatg
gtcttaccatttgagcctttgataatggtgtttcaaaatatacaatattttgttgatacc
cccccgaaattgagagagcaaggctttgcagaaaagaaactccaacttcttcacgatatt
acgggtgtcttcagacctggtgtccttacagctttgatgggtgtcagtggggcaggaaaa
acaactctcatggatgttctatctggaaggaaaacatttggtattattgaaggagatata
agaattggaggatatcccaaggtccaacatacatttgcgaggatatcaggctactgtgag
cagaatgacatacattctccgcaaattactgttgaagaatcggtgatatattctgcttgg
ttgcggttgtcacctcaaattgaccagactactagatctgaatttgtaaaacaagttctt
caaactattgagcttgatggaattaaagatgctttagttggcattcctggcgtaaacggt
ttatcgactgagcaacgtaaacgactcactattgcagtagagcttgttgccaatccatcg
attatattcatggatgaacccacatcaggcctagatgctagagcagcggcaattgtcatg
cgtgctgtgaagaatgttgttgatatgggaaggacagtagtttgtaccatccatcagccc
agtatagacatattcgaatcctttgatgagttgattctaatgaaaagaggaggacaaatg
atctattctggaccattgggtcaacactcaagcaagcttattgagtattttgagggtata
ccgggtgtaccgaagattaaagataattacaatccagcaacttggatgttagaaattacc
tctatgtctatagaaacggagcttggtttagatttttcccatctttataaagaatcttct
ctatatcgaaacaatgaacaggacttgttcaacatacttggctcaatgttcattgccatg
atattcttaggcgtaaacaactgttcgacgatcatgccgtttgtggcaagagaacgcacc
gttttgtaccgggaaaaattcgccggaatgtactcttcacgagcctattcatttgcacag
gtggccattgagattccttacatactcctccaagcgattctatttgtgagcattacgtat
ccaatgattggatacttttggtcagcttataaggtcttctggtatttctacacaaccttg
tgtacattgctcttctttaattacatgggaatgctgcttatgtcattgagcccaaatgtt
caagtagcttctgtattggcggctccctgctacactttactgaatctattctcagggttc
ttgatacccgggccaaaaattccaaagtggtgggtttggtgctactggatttgtccgaca
gcgtggagtctgaacggcctccttacttcacaatatggagatataagcaaagagatcacg
acattcggaaaactgacgcccgttaattctttcataaaagattattttgggttccagcat
aatcatttaggttttgtggctattgctcttgctgccttcccagtcatttttgcttctctg
tttacattcttcattggtaaattgaatttccaaaggaggtga
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