Magnolia sinica: 131231402
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Entry
131231402 CDS
T09699
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131231402
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131231402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
Cnd1
HEAT
Phage_TAC_9
Motif
Other DBs
NCBI-GeneID:
131231402
NCBI-ProteinID:
XP_058083552
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All DBs
Position
17:21401277..21462299
Genome browser
AA seq
1151 aa
AA seq
DB search
MEDAAAASETSIRPPKRGRDLDPSDGGPSTSTHLIGEKPDQVINGSDQVPDELDQGSGDG
LFDDLDELEPRTKKKRTTDAIVVHKEIDQSLIDVIKSNGKLIPHAVKNWVERYENNPKSA
IVELLMMLFEACGAKYHLDEGSLDETDVDDVVVSLVNHARNGDVEDYYSSKRKELKNFKE
NLASFWDNLVIECQNGPLFDQVLFEKCMDYVIALSCTPPRVYRQVASLVGLQLVTSFITV
AKMLGGQRETTQRQLNAEKKKRNDGPRVESLNRRLSTTHEKITVTEEMMRKIFTGLFMHR
YRDIDPDIRMSCIKSLGIWIVSYPALFLQDLYLKYLGWTLNDKSAAVRKTSVLALQNLYE
VDDNVPSLGLFTERFCNRMIDLADDIDVSVAVSAIGLLKQLLRHQLLADDELGPLYDLLI
DEPPMIRRAIGELVYDHLIAQKFSSSSSGSRGEDTGSSEVHLGRMLQILREFSTDPILSA
YVIDDVWDDMKAMKDWKCIISMLLDENPMIELTDVDATNLVRLLYQSAKKAVGEKIVPAT
DNRKQYYNKAQKEALENSRREITVAMMKSYPQLLRKFLADKTKVSSLVEIILYLKLELYS
LKRQEQNFKTVLQLIKDAFFKHGEKTTLRSCVKAITFCSAESKAELQDFAQNKLKELENE
LIVKLKFAMKDAVVGDDEYSLLVNLKRLYELQLEKCVPNESVYDDLVSTLQNLKNADDEV
VGFLLLNMYLHVAWSLHSVDSENPSEASVSSLLSKRTTLFEKLEYFLHTLLEVGEERKSG
GLLSSRVCIILAEMWCLFRKSRFSSTKLEGVGFCPDNSIIQKFWKLCEQRLNISDETEDE
DVNEEYIEETNPDTVMIAAAKLVASDTVPKDYLGPEIISHFVMHGASVAEIVKHLISALK
KTANDDVPDMFLEALKRAYQRHVVELSKSDDESMSGKSLQEFKDLATRLSGTFVGAARNK
HRSHILKICKDGISFAFVDAPKQLAFLEGAVLQFVSKLPTSDVLEILKDVQKRSENVNTD
EDPSGWRPYYTFVEHLREKYAKNEGFQDEKEGNASKRRRRRGRPRKARNLRGRKLFDEEG
SSEEEDFISASEPEEQDEEEEMEDGEEELPLIHSFRSSAKLRSMRVSQSESRGRAETADS
VQAPHRDNNAS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgcagctgcagcttcagagacgtcgatccgccctccgaagaggggtagggat
ttggatccttccgatggcggtcctagcacatctacccatttgatcggagaaaagcctgac
caggttatcaatggcagtgatcaggtcccagacgagctggatcaaggatcaggcgatgga
ttgtttgatgatctcgatgagttggagccgagaacaaagaagaaacggactacggatgcg
attgtggtacataaagagattgaccagagcttgattgatgtaatcaaaagtaatgggaag
ctcattccacatgctgtcaaaaactgggttgagcgatatgagaacaatccgaaatccgca
attgttgaactcctgatgatgctatttgaggcatgtggagctaaatatcatcttgatgaa
ggttccctggacgagactgatgtggatgatgtggttgtctctctggtgaatcatgctagg
aatggggatgttgaagattattacagttccaaacgcaaggaacttaaaaatttcaaggaa
aacctggcttcattctgggacaatttggtcattgaatgtcaaaatgggccattgtttgat
caggttttgttcgagaaatgcatggattatgtgattgccctgtcatgcactcctccaaga
gtttatcgtcaggtggcttcattggtgggtctccagcttgtgacgtcttttataactgtt
gcaaaaatgcttggtgggcagcgtgaaactactcagagacaattgaatgctgaaaaaaag
aaacgcaatgatggtcctcgtgtggagtcattaaatagaaggctgtccacaacccacgag
aagataactgtgacagaagagatgatgcgaaaaatatttacagggttgtttatgcatcgg
tatcgggatattgaccctgacatccgaatgtcatgcatcaaatctcttggtatttggatt
gtatcctatccagcgctgttcttgcaggatttgtacttgaaataccttggttggacacta
aatgacaaaagtgctgctgtcagaaaaacttctgtcctggccttgcaaaatctttatgaa
gtggatgataatgtgccatcacttggtcttttcacggaaagattttgcaaccgaatgatt
gatcttgcagatgacattgacgtttctgtggctgtatctgccataggacttcttaagcaa
ctactaagacatcagctgctagcggatgatgaattgggccctttgtatgatttgctcatt
gatgaaccaccgatgatcaggcgtgctataggagaactggtgtatgatcatttgattgct
caaaagtttagcagctcctcatcagggtccagaggggaagacactggatcatctgaggtt
catttgggaagaatgttgcaaatactgagagaattctcaacagatccaattcttagtgcc
tatgttattgatgatgtttgggatgacatgaaggccatgaaagattggaagtgtattatc
tctatgctcctggatgagaatccaatgattgagcttactgatgttgatgcaacaaacttg
gttcgattgctttatcaatctgccaagaaggctgttggagaaaagattgtccctgctaca
gataaccgtaaacaatattacaataaagctcaaaaggaagcactggaaaatagcagacgt
gaaataactgttgccatgatgaagagctacccgcagcttttacgcaaattcttggctgat
aaaacgaaggtttcatcactggttgagataattttgtatctgaaacttgagctttactca
ctgaagagacaggaacagaatttcaaaaccgttcttcaactaataaaagatgcatttttc
aagcatggcgagaagaccactttgaggtcctgtgtcaaggccatcaccttttgttctgct
gaaagcaaagcagaactgcaagattttgctcaaaataaactaaaggaacttgagaatgag
ctgatagttaagcttaagtttgccatgaaagatgcagtggtgggtgatgatgaatattcc
cttctagtgaatttgaaacggttgtacgagcttcaattggaaaaatgtgttccaaatgaa
agtgtatatgacgatctggttagcacccttcagaatctcaaaaatgcagatgatgaggtt
gttggttttctgcttctgaacatgtacttgcatgtagcgtggagtctccattctgttgac
agtgaaaatccttcagaagcatctgtatcttctcttttgtccaagcgcactaccctgttt
gagaaactagagtactttttgcacacccttcttgaagttggggaggagagaaaaagtgga
ggtcttctttcttcaagagtctgtatcatacttgcagaaatgtggtgcttgttcagaaag
tcaaggttttcctcaacgaagctggaaggagttggattttgtccagacaattcaattatt
caaaagttttggaagctttgtgagcaacggctcaacatttcagatgagacagaagatgaa
gatgtgaatgaagaatatattgaagagacaaatccagatacagtcatgattgctgcagca
aaattagtggctagtgatacagttccaaaggactatcttggtccagagatcatttctcac
tttgtaatgcacggagcaagtgtggcagagatagtcaagcatctgatctcagctttgaag
aaaacagcaaatgatgatgtccccgatatgtttctggaagcattgaaaagggcctaccag
cgacatgtggtggaactttccaaaagtgatgatgaatcaatgtctggcaagtcccttcaa
gagttcaaggatctagctacacggctttctggaacatttgtcggtgcagctcgcaacaag
catagatcacacattttaaaaatttgcaaggatggtatttcttttgcctttgtggatgct
ccgaagcagttagcttttctagagggagctgtgcttcaatttgtatccaaacttcccaca
tcagatgtcctagaaattctaaaagacgtccagaaaagatcggagaatgtgaacacagat
gaagatcctagtggctggcgcccctattacacatttgtcgagcacttgcgtgagaagtat
gcaaagaatgagggtttccaagatgagaaggaaggaaatgcatcaaaacgccgccgccgt
cgaggtcgtccacgaaaggcgaggaatttgcggggaaggaagctttttgatgaggaaggt
tcgagtgaagaagaagattttattagtgcgtcagagccggaggaacaagatgaagaggaa
gaaatggaagacggtgaagaggagcttcctctgatacattcctttagatcatctgccaag
ttgaggtcaatgagagtttcacagtcagaaagcagaggtcgagcagagactgcggattct
gttcaagctcctcatagggataataatgcttcttaa
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integrated database retrieval system
