Magnolia sinica: 131231407
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Entry
131231407 CDS
T09699
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
msin
Magnolia sinica
Pathway
msin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131231407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msin02000
]
131231407
Transporters [BR:
msin02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
131231407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_22
AAA_29
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
131231407
NCBI-ProteinID:
XP_058083561
LinkDB
All DBs
Position
17:43166653..43351182
Genome browser
AA seq
1882 aa
AA seq
DB search
MGGSQRQLKAMLRKNWLLKIRHPFTTFTEILLPTVVMLLLIAVRTRVDTRLHPAQPYIRK
GMYVEVGKSDISPSFESILELLYASGEHLAFAPDTEETTQMLGLLSLRFPLLKVVGKIYK
DELELETYIRSDLYGVTDQTKNCSNPKIRGAIIFHEQGPQVFDYSIRLNHTWAFSGFPDV
KTIMDTNGPFVNDLELGVSAVPTLQYGFSGFLTLQQVLDSFIIFASQQNETIIASGALGK
PSLIKYLWTRFNPSNIRIAPFPTRAYTDDEFQSIIKKVMGVLYLLGFLHPISRLISCAVF
EKEQKIKEGLRMMGLHDEIFYLSWFITYVIQFAVTSGVITACTMSSLFMYSDKSVVFMYF
FLFGLSAIMLSFLISTFFSRAKAAVAVGTLSFLGAFFPYYTVNDTAVPMTLKVLASLLSP
TAFALGTVNFADYERAHVGVRWSNIWQASSGVNFLVCLLMMMLDTVLYCAIGLYLDKVLP
RENGVRQPWNFLFKKCFWGKKSIVCQNASNVGVKVGKNKATFANKDGGEPAIEAISLDMK
QQELDSRCIQIRNLHKVYMTRKGKCCAVNSLQLSLYENQILALLGHNGAGKSTTISMLVG
LLPPTSGDALVFGRSIRTDMDEIRKGLGVCPQNDILFPELTVKEHLEIFAVLKGVEEELL
ETKVHEMVDEVGLADKVNTVVGALSGGMKRKLSLGIALIGHSKVIILDEPTSGMDPYSMR
STWQLIKKIKKGRIILLTTHSMDEADVLGDRIAIMANGSLRCCGSSLFLKHRYGVGYTLT
LVKAASSASVAADIVHRHVPSATRLSDVGTEVSFRLPLASSSAFEGMFREIESCIKRPGT
YGGSSSNEDECSFGIESYGISVTTLEEVFLRVAGCDFTEIENIDHNKAHSGPDAVVSEAA
HHYPQKKAPDFKLLFWNYKKLSGMIFSTVARVCSIIFTTFFSFITFLNVQCCGCGIITRS
TFLQHSSALLKKRAISARRDRRTVVFQLLIPAVFLFFGLLFLKLKPHSDQQSVTLTTSHF
NPLLRGGGGGGPIPFNLSFPISEKVASYIKGGWIQRLTPRMYKFPDPEKALGDAIYVAGP
VLGPILISMSEYLITSLNESYQSRYGAIVMDDQNDDGSLGYTVLHNSTCQHAAPTFINLM
NSAILRLATENDNMTIQTRNHPLPMTSSQHSQHHDLDAFSAAIIVTIAFSFIPASFAVAI
VKEREVKAKHQQLISGVSILSYWFSTYIWDFISFLFPVSFAVILFYIFGLDQFVGSGCLL
PTIFLFLEYGLAVAASTYCLTFFFSDHTVAQNVVLLVHFFSGLILMVISFIMGLVQATKS
ANSFLKNFFRLAPGFCFADGLASLALRRQGMKLGSGNETLDWNITGASIFYLAVESIIYF
VLTIVLELLPPQKLNLFTIKGWWRRFRTVHHGTSESYLEPLLNSFSKNVALEVDEDTDVQ
AERQRVLSGSVDNAIIYLRNLRKVYPGGVNHPSKVAVQSLTFSVQEGECFGFLGTNGAGK
TTTLSMLTGEDCPSDGTAYIFGSDICLNPRAARQHIGYCPQFDALLEFLTVQEHLELYAR
IKGVPEMRMRDVVEEKLMEFDLWKHANKPSYSLSGGNKRKLSVAIAMIGDPPIVILDEPS
TGMDPIAKRFMWEVIARLSTRQGKTAVILTTHSMNEAQALCTRIGIMVAGRLRCIGSPQH
LKRRFGNHLELEVKPTEVSCTELDKLCRRIQETLFDFPCHPRSIIGDLEVCIGASDSIAS
DNIAEISLSQEVIIAIGRWLGNEESIRTLVSSTPFTDGVFGEQLSEQLIRDGGIPLRIFS
EWWLAKEKFSVIDSFILSSFPGATFQGCNGLSVKYQLPYNEDSSLADIFGHFERNRVKLG
VAEYSISQSTLETIFNHFAANP
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgggtggttcgcagcggcagctgaaagccatgctccggaagaactggcttctcaaaatt
cgccatcccttcaccactttcactgagattctgcttccgacggttgtcatgctgttgctg
attgctgtgaggacaagagtcgatactcgattgcatccagcgcaaccttatatcagaaag
ggcatgtatgttgaagtgggcaagagtgacatatctccaagcttcgagtcaatcctggag
ttgctgtatgcgagcggtgagcatctggcatttgcaccggatacagaggagacaacacag
atgctgggtttgttatctttaagatttcctctattgaaggtggtggggaaaatttacaaa
gatgagctagagctagaaacatacatacgttcagacctttatggtgttactgatcaaacc
aagaactgttcaaatcccaaaatcagaggagcaataatatttcatgaacaaggtcctcag
gtctttgactacagcattcgtctgaaccacacatgggctttctcaggatttcctgatgtc
aaaactattatggacacgaatggtccttttgtcaatgatttggaattgggtgttagtgct
gtaccaactctacaatatggcttcagtggttttttgacattgcagcaggtgctggattca
tttattatatttgcctcacaacaaaatgaaactattattgcttctggcgcacttggaaaa
ccctcgcttatcaagtacctctggacacgttttaatccatcaaacataaggatagctcca
tttccaactcgtgcatacaccgatgatgagtttcagtctatcattaagaaagtcatggga
gtactctatctattaggatttctccacccaatttctcgcctgatcagctgtgctgttttt
gagaaggaacagaagataaaagaaggtcttcgcatgatgggtcttcacgatgagatattc
tatctttcttggttcattacatatgtgatacagtttgcagttacttctggagtcattacg
gcctgcacaatgagcagccttttcatgtatagcgataaatcagtggtgtttatgtacttc
tttttgtttggtctcagtgcaattatgctttcctttttgatctctacattcttttcacga
gcgaaagcagcggtggcagtgggcactctttcttttcttggagccttcttcccttactac
acagtcaatgacaccgctgtccctatgacattgaaggtcttggcttctttactttctcct
acggcttttgctcttgggacagtaaactttgctgattatgagcgtgctcatgtcggagtc
cgttggagcaatatatggcaggcttcatctggtgtaaattttttggtctgccttctcatg
atgatgcttgacacagtgttgtactgtgccattgggctgtacctagacaaggttcttcct
agggagaatggagtgcgtcaaccatggaattttctattcaagaagtgcttttgggggaag
aaaagcattgtctgtcagaatgctagcaacgtcggtgttaaggtggggaaaaacaaggca
acctttgctaataaagatggtggcgaacctgctattgaagcaataagcttggatatgaaa
caacaagaacttgatagtcgatgtatccagataaggaatctgcacaaagtctacatgact
agaaagggaaagtgttgtgccgtgaactcattacagctcagcttgtatgaaaatcagatt
cttgctctcctaggacacaatggagctggtaaaagcacaacaatttctatgcttgtgggc
cttcttcctcctacttctggggatgctctggtttttggcagaagtattagaacagacatg
gatgaaatacggaagggtctgggtgtatgccctcaaaatgatatactctttcctgaatta
acggtcaaggaacatttggaaatttttgccgttttgaagggtgttgaggaagaattattg
gagacaaaagtacatgaaatggttgatgaagttggtttggcagataaagttaacacagtt
gttggggccctatctggtgggatgaagaggaagttgtcccttgggatagcacttatagga
catagtaaggttatcattcttgatgaaccgactagtggaatggatccatactccatgcgt
tcaacatggcaactaatcaagaagatcaagaagggcaggataatcttgctgaccacacac
tccatggacgaggctgacgtgcttggtgatcgcatcgcaatcatggcaaatggttctttg
agatgctgtggaagttctcttttcttgaagcatcggtacggtgttggttataccctaact
ttggtcaaggctgcatctagtgcctctgtagctgccgacattgttcatcgacatgttcca
tctgcgacacgcttaagtgatgttggtacagaggtttcttttagacttcctctagcatca
tcatctgcgttcgagggcatgttccgggaaattgagagctgcatcaaaagacctggcacg
tatgggggaagcagcagtaatgaggatgaatgctcttttggcattgagagttatggtatc
tctgtcacaacattggaggaggtgtttctgagagttgcaggatgtgatttcactgagatt
gaaaacattgaccataataaagctcattctggacctgatgctgtggtttctgaagccgcc
catcattatcctcaaaagaaggcccccgatttcaaactacttttttggaattataagaag
ctttcaggaatgatattttctactgtggcaagagtttgtagtataatttttactacattt
ttcagtttcataaccttcttaaacgttcaatgctgtggttgtggaatcattacaaggtct
acatttttgcaacattccagtgctctactaaaaaagagggctatctctgctcgtcgagac
cgaaggacagttgttttccagcttcttatccctgctgtcttcctgttttttggacttctt
tttctcaagcttaagccacattctgatcagcaatcagtgacccttacaacatcccacttt
aatcctttgctacgagggggcggtggtggtggaccaattccattcaatctatcttttccc
atctcagaaaaggttgcatcttatattaaagggggttggattcagagattgacaccaagg
atgtataagtttcctgatccggagaaggcgcttggtgatgctatttatgtagcaggcccc
gtattgggtcctatcctaatttcgatgagtgaatatctaataactagcttgaatgaatca
taccagtcaaggtatggcgcaattgtgatggacgatcagaatgatgatggtagtttagga
tacactgtacttcataacagtacttgtcagcatgcagctccaacctttattaatttgatg
aacagcgcaattttgaggctcgctactgaaaatgacaatatgacgattcaaactcgcaat
cacccattgccaatgacaagttctcagcattcacagcatcatgatctggatgcattttct
gctgcaattattgttaccattgcattctccttcatccctgcatcatttgcagttgcaatt
gttaaggaacgtgaagtcaaagcaaaacatcaacaactaattagtggggtgtccatacta
tcatattggttttctacatacatatgggacttcatcagcttcttattccctgtatcattt
gcagtaattcttttttacatttttggtctagatcaatttgttggaagtggttgtttgttg
ccgacaatcttcttgtttctggaatatggattagcagttgcagcatcaacatattgcctc
acctttttcttttctgaccacacagttgcacagaatgtggtcctgttggtacactttttt
agtgggcttattcttatggtcatctcattcattatgggacttgtacaagcaaccaaaagt
gcaaattcttttctcaagaactttttcaggttagcaccgggattttgctttgcagatgga
cttgcatcactcgctcttcgacggcaaggaatgaaacttggatctggcaatgaaaccctc
gattggaacataactggtgcctctatcttttacttagcagtggagagcatcatttacttt
gttcttacaatcgttcttgaactcttacctcctcaaaaattaaacttattcacaattaag
ggatggtggaggaggtttagaacagttcatcatggcacttctgagagttacttggaacca
cttcttaattcattctctaaaaacgttgctcttgaagttgatgaggatacagatgtacag
gcagaaagacaaagggtgctttcaggttctgttgataatgccataatctatttacggaat
ctccggaaggtttaccctggaggagtgaatcacccttcaaaagtagcagttcagtcctta
actttctctgttcaagaaggagaatgttttggttttctaggaacaaatggagcagggaag
actacaactttatcgatgttaactggagaggactgtccatctgatggaactgcatatata
tttgggagcgatatatgtttaaaccccagggcagctcgtcagcatattggctattgccct
cagtttgatgctctgcttgaatttctgactgtccaagagcatcttgagctttatgcaagg
ataaaaggagttcccgagatgaggatgagagatgttgtcgaagaaaaattgatggagttc
gacttgtggaaacacgctaataaaccatcatattctcttagtgggggcaataagcgcaaa
ttgtctgttgctattgcaatgattggtgaccctccaatagtaattcttgacgagccatct
acaggcatggatcctattgcaaaaagattcatgtgggaagttatagcacgcctgtcaact
agacaaggaaagacagcagttatcctcactactcatagtatgaatgaagctcaagctctc
tgcacacggattggaataatggttgccggacggcttagatgtattggaagcccccagcat
ttgaaaaggcgtttcggaaatcatctagaactagaggtaaagcctactgaggtaagctgc
actgagttggacaaactctgtagaagaattcaagaaacactcttcgactttccatgtcat
ccaaggagcataatcggcgatcttgaagtttgcattggtgcaagtgattccatagcatca
gacaacatagcagagatcagcttatcacaggaagtgatcattgcaattggacgctggctt
ggcaatgaagaaagtataaggacgcttgtatcttccacaccttttactgatggtgtgttt
ggtgaacaattatcggagcaattaatccgtgatggtggtattccattgagaatattttca
gagtggtggttggccaaagaaaagttctcagtaatcgattcttttatcctttcttcgttt
cccggagcaacatttcaagggtgcaatgggttgagtgtcaaatatcagttgccatacaat
gaagactcctcacttgcagacatctttggacacttcgaaagaaacagggtcaaactagga
gtggcagaatacagtatcagtcagtcaacattggagaccatctttaatcatttcgctgca
aacccataa
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