Magnolia sinica: 131231492
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Entry
131231492 CDS
T09699
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131231492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131231492
Spliceosome [BR:
msin03041
]
Complex A
Other components
Complex A specific factors
131231492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
RRM_1
SF1-HH
KH_1
RRM_5
RRM_occluded
zf-CCHC
KH_12
Ribosomal_L32p
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
131231492
NCBI-ProteinID:
XP_058083691
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Position
17:71242768..71249065
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AA seq
602 aa
AA seq
DB search
MFTADVNMLYETNMGKRKALGGLNTQEGDNNVEEPDSASIRAREEPSEEKSVPRPASEGK
ENTGSSGKRRRNGWDPQPVGDEDTVEGDGRSKRRMIRWASDDDQLKMLGPIQLPDFVKEP
TVGADFSTEIRKLNMRLVLINRKLQGSGVLDNRLEEQRSPSPLPVYDHLGTQINLREVRF
REQLIQQRQRIISKLIRMNPTFKHPPNYKPRKFYKKLYIPQKEYPGYNFIGLIIGPRGNT
QKRLEKESGARILIRGKGSVKEGKAHHRRDMKPDPSENEDLHVLVEADNKESLDAAVGMV
EKLLVPVDEVTNEHKTAQLKELAELNVVCKTCGELGHRQHTCPSRNSTYSSGATADCPSM
ASGPGSKMVSLHHSYLGGRPAYSTMPCYSPYPQFGLESRIDKDIADSNLYVAYLPQAVDD
HQLIGLFSPFGRIISVKLVRDKMTGLSKGFGFVKYADPVDAAKAAAHMNGHKIDGKTLVV
RLAGRPLTYLGPMSVHPENPDQPAWPGPPALMQPRSHAAFTNSNAFKPSHSPVYSVQTGP
FSRQLPSSCGPPLYHPSSSPCQYQPFYTTPKSCPSSCVYLTPPMYSQPNSWSLGSCSPSW
AR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgcagatgtgaacatgttatatgaaacaaacatggggaaacggaaggcttta
ggcggtttgaatactcaagaaggagacaataatgttgaggaacctgattctgcaagcata
agggcaagagaagaacctagtgaggaaaaatctgtgccccggcctgcttctgagggaaag
gaaaatacagggagttctgggaagcggaggcgaaatggatgggatccacagccagtaggg
gatgaggacactgttgaaggtgacgggagaagcaaaaggaggatgatcagatgggccagt
gatgatgaccagttaaaaatgctgggtcctatacaacttcctgattttgtgaaggaacct
acagttggagctgatttcagcactgaaattcgtaaattgaatatgcggcttgtgctgata
aacaggaagctgcagggatcgggtgtgctcgacaacaggttggaagaacaaagatctcca
tcaccgttgccagtatatgatcatttgggaacccaaataaatttaagggaggttaggttc
cgcgaacaactcatccagcagaggcaacggatcatttcgaaattgattcggatgaacccc
actttcaaacatcctcccaactacaagccccggaaattttacaagaagctctacatacca
cagaaagaataccctgggtataacttcattggtctcataatcggcccccgcggcaatacc
cagaagagactggagaaggaatctggtgctagaattctcattcgggggaaaggctcagtg
aaggaagggaaagctcatcataggcgggacatgaagcctgacccgtcagaaaatgaagac
cttcatgtcttggtagaagcagataacaaggaatcattggatgctgcagtaggaatggtt
gagaagctactggttccagttgatgaggtgacgaatgagcataaaactgcccagttaaaa
gagctcgctgaactgaatgtcgtgtgcaaaacgtgtggtgagctggggcacaggcaacat
acatgcccaagtagaaattcaacatacagcagtggtgctactgctgattgcccttcgatg
gcatctggcccagggagtaaaatggtcagcctacaccatagctatcttggtggacggcct
gcttatagtactatgccttgctacagcccttatcctcagtttggtcttgagagcagaatc
gacaaggatatcgctgattcaaatctatacgtggcataccttcctcaggctgtggatgat
catcagttgatcgggctgttttctcctttcggcaggatcatcagtgtgaaactagtcagg
gacaaaatgacaggtttaagcaaaggctttggctttgttaagtatgctgatcctgtcgat
gctgcgaaggctgcggcccacatgaatggacacaagattgatgggaagacactggtggtt
aggctagcaggtcgcccgctgacttatcttggccccatgtctgtccacccagagaatcct
gaccaaccagcttggccaggcccaccagcgctgatgcagccaagatctcatgctgccttc
actaatagcaatgcattcaaaccgtctcattcgcctgtctactcagtgcaaactggacct
ttcagcagacagttgccttcatcttgtgggccaccattgtatcatcccagcagctccccc
tgccaatatcagccattctacactactccgaaaagctgtccatcttcatgtgtttatctc
actccaccaatgtacagccagccaaattcctggagcttgggcagctgttcgccttcgtgg
gcaagataa
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