Magnolia sinica: 131231632
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Entry
131231632 CDS
T09699
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131231632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msin02000
]
131231632
04147 Exosome [BR:
msin04147
]
131231632
04090 CD molecules [BR:
msin04090
]
131231632
Enzymes [BR:
msin01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
131231632
Transporters [BR:
msin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
131231632
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131231632
CD molecules [BR:
msin04090
]
Proteins
131231632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_30
AAA_29
RsgA_GTPase
APS_kinase
nSTAND1
AAA_25
DUF815
AAA_15
Rad17
DUF87
DUF1360
Motif
Other DBs
NCBI-GeneID:
131231632
NCBI-ProteinID:
XP_058083871
LinkDB
All DBs
Position
17:48738107..48748853
Genome browser
AA seq
1350 aa
AA seq
DB search
MSQDSQEIKTVEQWKWSEMQGLELISSSSSTPTSHSLIFKQDKHPPIQEVEAEMENTTPA
SSSSPAAASSTPPNPPNGKNDEKPSPSPPSSGFSELFRFADSLDYLLMSIGTAGAIVHGC
SLPIFLRFFADLVNSFGSNSNNPDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGE
RQSTKLRIRFLEAALNQDVQYFDTDVRTSDIVFAINSDAVMVQDAISEKLGNFIHYMATF
VSGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKLTSKSQQALSEAGNIAEQTLAQ
IRTVLSYVGESRALQAYSAALQVAQRIGYKSGFAKGIGLGSTYFTVFCCYALLLWYGGYL
VRHHYTNGGLAIATMFSVMIGGLALGQSAPSMTAFAKAKVAAAKIFRTIDHKPGIDRNSE
TGIELSSVTGHVELKNVDFSYPSRQEVRILSNFSLNVPAGKTIALVGSSGSGKSTVVSLI
ERFYDPTSGQVLLDGQDIRTLKLRWLRQQIGLVSQEPALFATTIKENMLLGRADATQIEI
EEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSA
LDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDDLIAKGD
NGLYAKLIRMQEMAHEAALNNARKSSARPSSARNSVSSPIIGRNSSYGRSPYSRRLSDFS
TSDFSLSLDASHPSYRLEKLAFKDQASSFWRLAKMNSPEWAYALIGSVGSVVCGSISALF
AYVLSAVLSIYYNQDHAYMRREIGKYCFLLIGVSSAALLFNTLQHLFWDVVGENLTKRVR
EKMLAAVLRNEVAWFDREENESARIAARLALDANNVRSAIGDRISVIMQNSALMLVACTA
GFVLQWRLALVLVAVFPIVVAATVLQKMFLKGFSGDLEATHAKATQLASEAVANVRTVAA
FNSESKIVGLFTSNLEAPLRRCFWKGQIAGSGFGVAQFLLYASYSLGLWYASWLVKHGIS
DFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIDPDDPDTTPVP
DRLRGDVEFKHVDFSYPSRPDIPIFRDLTLRARAGKTLALVGPSGCGKSSVIALVQRFYE
PSSGRVLIDGKDIRKYNLKSLRRHVAMVPQEPCLFAATIHDNIAYGAESATEAEVIQAAT
LANAHKFISALPDGYRTWVGERGVQLSGGQRQRIAIARAFVKKAELLLLDEATSALDAES
ERCVQEALERASSGRTTIVVAHRLSTVRNAHVIAVIDDGKVAEQGSHSHLLNHHPDGCYA
RMIQLQRFTHVPASGAGSSTRAKEEDGEQK
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctcaagagataaagacggtagagcagtggaaatggtccgaaatgcaa
ggccttgaacttatttcctcttcttcatctactcctacctctcattctcttatatttaag
caagacaagcatcccccaattcaagaagtagaagcagagatggaaaacactactcctgct
tcttcttcttctcctgctgctgcttcttctactcccccaaatccccccaatggtaagaac
gacgagaaaccttccccatcgcctccttcttccggcttctccgagctctttcgcttcgca
gacagcctcgattacctcctgatgtctattgggactgctggggccatcgtccatggctgc
tccctccctatcttcctccgcttcttcgccgatctcgtcaattcctttggctccaactca
aacaatcccgacaagatgatgcaggaagtcctcaagtatgcattctactttctggtggtc
ggcgccgcgatctgggcgtcttcttgggcagagatttcatgctggatgtggacgggcgaa
cggcaatcaaccaaattgagaatcagattcctcgaagctgctctgaatcaggacgtgcag
tacttcgacacagacgtccggacgtcggacatcgtcttcgccatcaacagcgacgccgtc
atggttcaggacgccatcagcgagaaattgggtaatttcatccattacatggcgacgttc
gtctctggttttgtcgtcggcttcaccgccgtgtggcagctggcgctcgtaacactcgca
gtagtcccactcatcgccgtgattggagcgatccacaccaccacattggccaagctcact
tccaagagccagcaagccctctcagaagctggaaatatagcagaacagacattagcccaa
atccgaacggttctatcatatgtgggtgaatccagagcgttgcaggcttactcggccgcg
ctacaggtggctcaaaggatcggttacaagagtggattcgcaaagggaattggattggga
tcgacttactttacagtcttctgttgctatgcattgctgctctggtacggcggatatctc
gttcggcaccattacaccaacggcgggcttgccatagctaccatgttctccgttatgata
ggcggattggctttaggacaatcagctccaagcatgactgcatttgctaaggcgaaggtt
gcagctgcgaagatcttccgcaccattgatcacaagccagggatagatcgaaacagcgaa
acgggcatagaattgagttctgtaacgggtcacgttgagctgaagaacgtcgatttttca
tacccgtcgaggcaagaggttcggatccttagcaatttttctctgaatgtgccagcgggg
aagaccatagctttggtgggcagcagtggctctggtaagagcactgttgtttccctcatt
gaaagattctatgatcccacttcaggtcaggtgctccttgatgggcaggacataaggaca
ctgaagctacgatggttgagacaacagataggtttggttagccaagagccagctcttttc
gcaacaaccatcaaagaaaacatgcttttgggaagggcagatgctacccagatagagatt
gaagaagctgcgcgtgtagccaatgctcattccttcatcataaagcttcctgatggctat
gatactcaggttggggagagaggattgcaattgtcgggtggacagaagcagaggattgca
atcgcgcgggccatgctcaagaacccggccatcctgctactggacgaggcgacgagtgct
ctcgattcagaatcagagaagctggtgcaggaggcccttgatcgtttcatgatagggagg
acgaccctcgtgattgcccaccgcctgtccaccatccgcaaggcggaccttgtcgccgtc
ctccaacaggggagcgtctccgagatcgggacccatgacgacctcatcgccaagggggac
aatggactctatgccaagcttatcagaatgcaagagatggcccacgaagcagctctcaat
aatgcaagaaagagtagtgccaggccttcgagtgccaggaactccgtcagctcgccaatc
atcggccgcaactcttcctacggacgatcgccatactcacgccggctctccgacttctct
acctctgacttcagtctctccctcgatgcctcccacccaagctaccgccttgagaagctt
gccttcaaagaccaggccagctccttctggcgcctcgccaagatgaactcccctgagtgg
gcctatgctctcattggctctgtggggtctgttgtctgtgggtcgataagtgccctcttt
gcctacgtcctcagcgctgtcctaagcatctactacaaccaagaccatgcatacatgagg
agggagattggcaagtactgcttcctactgatcggagtatcatcggcagcactcctattc
aacacactccagcatctgttctgggatgttgtcggcgagaacctcacgaagcgagtgagg
gagaagatgcttgcagcagttctgcgtaatgaggtggcgtggttcgaccgtgaggagaat
gagagtgcaaggatcgcggcccgcttggcattggatgcaaacaacgtgcggtctgcgata
ggggaccgaatatctgtgataatgcagaactcagctctcatgcttgttgcttgcactgct
gggttcgtcttgcagtggcgccttgcgctggtgcttgttgccgtctttcctatcgtggtt
gctgccactgtgttgcagaaaatgttcctgaaaggcttctccggcgacttagaagctacc
catgccaaggccactcagctagccagcgaagctgtcgccaatgtccgaacagtcgcggca
ttcaattccgagtcaaaaatcgtaggactcttcacctccaacctcgaagctccactgcgt
cgctgcttctggaagggacagatcgctggcagcggcttcggtgtagcccagttcttgctc
tacgcctcctattccctcggcctatggtacgcgtcctggctcgtcaaacacggaatctcc
gatttctccaagacaatccgcgtcttcatggtcctcatggtctccgccaatggcgccgcc
gagacactaacactagctcccgacttcataaaaggcggccgtgccatgcggtctgtcttc
gacctcttagaccgcagaactgaaatagacccagacgatcctgacacaactcccgtccct
gaccgactccgtggagatgtcgaattcaaacatgtagacttctcctacccatcacgccca
gacatacccatcttccgtgacctcaccctccgagcccgagctggcaagacgctcgccctc
gtgggtccgagcgggtgcgggaaaagctcagtcattgcacttgtacaacgattctacgag
ccatcatctgggagagtactcatagacggaaaggacatacgtaaatacaacctcaaatcg
ctacggcggcacgtagcgatggtcccacaggagccgtgcctattcgcagcaaccatacat
gataacattgcatatggagctgagtctgcaacagaagctgaggtgatccaggcagctacg
ttggcaaatgcacacaagttcatttcagccctgcctgacgggtaccgcacgtgggtcgga
gagaggggtgtgcagctatcaggaggccagcggcagaggattgccatagcacgtgctttc
gtgaagaaagccgagttgttgctgctcgacgaggcgacgagtgcgctggatgctgagtca
gaacggtgcgtgcaggaggcgcttgagcgcgcgtcgtcaggacggacgactatcgttgtc
gcacataggctttcgacggtcaggaatgctcacgtgattgccgtgattgacgatgggaag
gtggcagagcaaggatcgcattcgcatcttttgaaccatcatcctgacggctgttacgca
cggatgatacagttgcagaggttcacgcacgtgccggcgtcgggtgctgggtcgtctaca
cgtgcgaaggaggaggatggggaacagaaataa
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