Magnolia sinica: 131231707
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Entry
131231707 CDS
T09699
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msin
Magnolia sinica
Pathway
msin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131231707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131231707
03009 Ribosome biogenesis [BR:
msin03009
]
131231707
04131 Membrane trafficking [BR:
msin04131
]
131231707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131231707
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131231707
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131231707
Membrane trafficking [BR:
msin04131
]
SNARE
SNARE associated proteins
Others
131231707
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131231707
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131231707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_22
AAA_5
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
Vps4_C
NB-ARC
AAA_24
TsaE
Zeta_toxin
DUF815
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-GeneID:
131231707
NCBI-ProteinID:
XP_058083978
LinkDB
All DBs
Position
17:55935643..55959326
Genome browser
AA seq
805 aa
AA seq
DB search
MAHHAESSDSKKKDFSTAILERKKAPNRLVVDEATNDDNSVVAIHPDTMEKLQLFRGDTI
LIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGHRVHIL
PVDDTIEGITGNLFDAFLKPYFLEAYRPVRKGDFFLVRGGMRSVEFKVIETDPAEYCVVS
PDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP
KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP
SIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALR
RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVDLERIAKDTHGYVGADLAALCTEA
ALQCIREKMDVIDLEDESIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVSWED
IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAAD
RVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDESSRHQIFK
ACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKRMKDAPE
AMEEDSNEEVAEIKAGHFEESMKFARRSVSDADIRKYQAFAQNLQQSRGFGSEFRFPERS
EAGAGAVGSDPFAASAGADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcccaccatgcagaatcatcagactcgaagaagaaggatttcagcacggccatcctt
gagaggaagaaggctccgaatcgtctggtcgttgatgaggcgaccaacgacgacaattcc
gtcgtagccatccatcccgacaccatggagaagctccagctcttccgtggcgataccatc
ctcatcaagggtaagaaaaggaaggatacgatctgcattgctcttgcggatgatacatgt
gatgagcctaagatccggatgaataaggtggtaaggtcgaaccttagggttaggcttggc
gatgtggtttctgtccaccagtgtccagatgtaaagtatggacaccgggtgcatatactg
ccggtggatgataccatcgaaggcatcaccgggaacctgtttgacgcgtttttgaaacct
tatttcctggaggcatatcggccagtaaggaaaggagatttcttccttgttagaggtggt
atgaggagtgtagaattcaaggtaatagagaccgaccctgcagagtactgtgtggtttct
ccagatactgagatcttttgtgagggggagcctgtccgaagggaggatgaagacagattg
gatgaagtgggttatgatgatgttggtggggtgaggaaacagatggcccagatccgagag
ctagttgagctcccactcaggcatcctcagcttttcaaatcaattggtgtaaaacctcca
aagggcattttgctgtatggcccccctggttctgggaaaacattaatagccagggctgtt
gctaatgaaaccggtgctttcttcttctgtatcaatgggccagagattatgtccaaacta
gcaggggagagtgaaagcaacctcagaaaggctttcgaagaagcagagaagaatgctcca
tcgattatattcattgacgagatcgactccatagcacctaagcgagagaagacgaatgga
gaagttgaaaggcggattgtatctcaacttttgactttgatggacggattaaagtcacgt
gcccatgttattgttattggggctactaaccggccaaacagcatagacccagctctgaga
aggtttgggagatttgatagagaaattgacattggggttccggatgaagttggacggctt
gaggtcctccgcattcacacgaagaacatgaaactctcagaagatgtggatctagaacga
attgcaaaggacactcatggctatgttggtgccgatcttgctgctttgtgcacagaggct
gcccttcaatgcatcagagagaagatggatgtcattgacttggaagatgaatccattgat
gcagagatactgaactccatggctgttactgatgagcacttcaagactgctctgggaacg
agcaatccatctgctctacgtgaaactgttgtcgaagtacccaatgtcagctgggaagat
attggaggccttgaaaatgtcaagagggagcttcaggagactgttcagtatcctgtggag
catccagaaaagtttgagaagtttggcatgtctccctcgaaaggagtacttttctatggc
ccccctggctgtgggaagacccttctagccaaggcgattgccaatgaatgccaagcgaac
ttcatcagtatcaagggtcctgaattgctcacgatgtggtttggggagagtgaagccaac
gtgcgtgaaatctttgataaggctcgccaatccgcaccttgcgtcctctttttcgatgaa
ctcgactcaattgcaactcagagaggcagcagttcgggagatgctggtggtgctgccgat
agggttctgaatcagctcctgactgaaatggatgggatgtctgcaaagaagacggttttc
attatcggtgccaccaacaggcctgatataattgatcctgcactgctgagaccaggccgt
cttgatcaactgatttacattcctctaccggatgagagctctcgccatcagatattcaaa
gcctgcctgagaaaatctcctatctcaaaagatgttgacctgagagctctagccaagtac
actcagggcttcagtggtgctgatattacggagatctgccagcgtgcttgcaagtatgcc
atacgtgaaaacatcgagaaggacatagaaagggagaaaagaatgaaggatgctcccgag
gctatggaagaggactccaatgaagaagtggccgagatcaaggcaggccactttgaggaa
tctatgaagtttgcacgcaggagtgttagtgatgctgacatccgcaagtatcaggcgttt
gcacaaaacctacaacagtctaggggttttgggagcgagtttcggttcccggagaggtcg
gaggcgggagcgggagctgtggggtctgacccatttgcagcctctgctggagctgatgat
gacgatctatacagttaa
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