KEGG   Magnolia sinica: 131231714
Entry
131231714         CDS       T09699                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
msin  Magnolia sinica
Pathway
msin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131231714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msin03041]
    131231714
Spliceosome [BR:msin03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131231714
 Complex B
    131231714
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 131231714
NCBI-ProteinID: XP_058083988
LinkDB
Position
17:73213022..73235086
AA seq 565 aa
MSGYEGRYEGYNNWSSATQAKGGGGEDYGGGSSPYDAFEDRDSQRQHNSRGSEHERPRTR
ERDREREKDRDRHHKDHYREKGVRDERGRDKSDDYDRHRSRDYDRHRDYDRDRERRHRHR
SRSRSKDKSSRNRSRSRSRSRSKSKRASGFDMAPPGAAAMPGTAIAGQMPGAPPAVPGMF
PSMFPFGTPQFGTLPLMPAQAMTQQATRHARRVYVGGLPPMANEQTIATFFSRVMSAIGG
NSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLA
AALGPSQPSPHLNLGAVGLTPGLDIVDSSIGGAEGPDRIFVGGLPYYFTEAQIRELLESF
GPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQA
KPDQEIILAQAQQHIAFQKMVLQAGGTPLPGVGLVSGLVAENPTKVVCLTEVVTADELRD
DEEYEEILEDMREEGGKFGPLLKVVIPRPDPTEEGIPGVGKVFLEYADTEGSAKAKAALN
GRRFGGNIVTAVYYPEEKFSSGDYE
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgtctggctacgaaggtagatacgagggctacaacaattggagctcggccactcaggcc
aaaggtggaggaggcgaagactacggcggaggttcttctccctacgacgctttcgaagat
cgagattcgcagcggcagcacaattctcggggatcagaacatgaaaggccaaggactaga
gaaagggatcgggagagggagaaagatcgggatcgccatcacaaggaccattatagggaa
aaaggtgtgagggatgaaagaggaagggacaaatctgatgattatgatcgtcatcgaagc
cgtgattatgacaggcaccgtgattatgatcgagacagagaaaggagacatagacataga
tcacgttctcgttcaaaggataaatctagtaggaatcgatccagatcacgctctcgctct
cgttcaaaaagtaaacgggcaagcggttttgacatggcaccgcctggtgctgctgcaatg
cctggtactgccattgcagggcaaatgccaggggctcctccggccgtgccgggaatgttc
ccaagcatgtttcctttcgggacgcctcagtttgggacccttccattgatgccagcacaa
gcaatgactcaacaggcaacaaggcatgcacgccgtgtatatgttggaggccttcctcct
atggcaaatgagcagacaattgcaacgttttttagccgtgttatgtctgctattggagga
aacagtgctggtcctggtgatgctgtggttaatgtgtacattaatcacgagaagaagttt
gcttttgtggaaatgagaactgttgaagaagcgagcaatgcaatggcattagacgggata
atgtttgagggagtttctgtgagggttcggagacctactgattacaacccttcattggct
gcggcactcggaccaagccaacccagcccccatctgaatttaggtgctgttggtctcaca
ccagggttggacattgttgacagttcaattggtggagcagagggacctgatcgtatcttt
gtaggtggattgccgtactattttacagaagcacagatacgggagctgctagagtccttt
gggcctctgcgtggattcgaccttgtcaaggacagggacacaggaaactcaaaaggttat
ggtttctgtgtctatcaggatccagctgtgacagacattgcttgtgcggcacttaatggt
ctgaaaatgggtgataagactctaactgttcgccgtgctactgccagcagtggacaggca
aaacctgatcaggagatcattttagcacaggcacaacaacatatagctttccagaaaatg
gtcttgcaggctggtggcacacctttgcctggtgttgggttggtatctggtctggttgct
gaaaacccaactaaggttgtctgcttgactgaggtggtaactgctgatgagctgagggat
gacgaagagtatgaagaaatattggaggacatgagagaagaaggcgggaagtttgggcca
ctactgaaggttgttattcctcgtccggacccaactgaggagggcattccaggagttgga
aaggtgttcttggagtatgccgatactgagggttctgcaaaggcgaaggctgcactcaat
gggaggagatttggaggtaatattgtcactgctgtctattaccctgaagagaaattttcc
agtggagactacgagtaa

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