Magnolia sinica: 131231716
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Entry
131231716 CDS
T09699
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msin
Magnolia sinica
Pathway
msin00061
Fatty acid biosynthesis
msin00071
Fatty acid degradation
msin01100
Metabolic pathways
msin01212
Fatty acid metabolism
msin04146
Peroxisome
Module
msin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131231716
00071 Fatty acid degradation
131231716
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131231716
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msin01004
]
131231716
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131231716
Enzymes [BR:
msin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131231716
Lipid biosynthesis proteins [BR:
msin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131231716
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of breast milk
131231716
Exosomal proteins of breast cancer cells
131231716
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
131231716
NCBI-ProteinID:
XP_058083995
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Position
17:complement(35751531..35878909)
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AA seq
657 aa
AA seq
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MDSSAAVTARRRLSAINNHLVSQDPQHQHLLERKETAGEFVSVQGYSIVLPEELQTGKWN
VYRSAHSPLKLVSRFPDHPDVGTLHDNFVHAVDTFRDFKYLGSRIRVDGTVGEYKWMTYG
EAGTARSAIGSGLIYHGVPRGACIGLYFINRPEWVIVDHACAAYSYVSVPLYDTLGPDAV
KYVVNHANVQAIFCVPQTLNIVVGGVDEHMPSLPSTTGVEIISYSKLLHQGHSNHKQFCP
PKPEDVATICYTSGTTGTPKGAVLTHGNLIANVAGSSIATKFYPSDVYISYLPLAHIYER
VNQIAMVYYGVAVGFYQGDNLKLMDDMAALRPTIFCSVPRLYNRIYAGITNAVKTSGVLR
ERLFNAAYNSKKQAIMNGSNPSRMWDRLVFNKIREKLGGRVRFMGSGASPLSPDVMDFLR
VCFGGRMLEGYGMTETSCIISAIDEGDRLSGHVGSPNPACEIKLMDVPEMNYTSDDQPYP
RGEICVRGPIVFQGYYKDDVQTKEVIDEKGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ
GEYIAPEKIENVYAKCKFITQCFIYGDSLNSSLVAIVSVDQDTLEAWAASQGIQYEDIKQ
LCNDPRARIAVLADMDGIGREAQLRGFEFAKAVTLVPEPFTLENGLLTPTFKASNLF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggattcatctgctgctgttaccgcacgacgtcggctttcagccattaacaaccatctg
gtctcccaagatcctcagcatcagcatctccttgagagaaaggagaccgccggggagttc
gtttctgtgcagggctatagcattgtacttccagaagaattgcaaacaggaaagtggaat
gtatacagatctgcacattcgcctctaaagcttgtaagtagattccctgatcatcccgat
gttggaactttgcatgataactttgtgcatgcagttgacaccttccgagatttcaagtat
ttgggttcacgaattcgggtcgatggaacagtcggagagtacaaatggatgacatatgga
gaagcaggtaccgcccgttcggcaataggttccggcctgatatatcatggggtaccaaga
ggagcctgtattgggctttattttatcaacagaccagagtgggtcattgtcgatcatgct
tgcgcagcatattcttacgtctcagttcctctatatgacactcttgggccagatgctgtt
aagtatgttgtgaatcatgctaatgtacaggctatattttgtgtaccacaaacattgaac
attgtagtcggaggtgttgatgaacatatgccatcacttccatccacaactggtgttgag
attatttcttattcaaaactactccatcagggacacagtaatcacaagcagttttgccct
ccaaaacccgaagatgttgcaactatctgctatacaagtggtacgactggcacaccaaag
ggagctgtattgactcatggaaacttgatcgcaaatgtagctggttcaagtattgccact
aaattctatccctcggatgtatacatatcctatctcccgttggctcacatttatgagcgg
gtaaaccaaattgcaatggtatactatggggttgcagttggcttctaccaaggggataat
ttaaagttgatggatgatatggcagctctaaggccaacaatattttgcagtgttcctcga
ttgtataatagaatttatgctggcattacaaatgctgtaaagacgtccggtgtcttaaga
gagaggctatttaatgctgcctacaattccaagaagcaagcaataatgaacggcagcaat
ccatcacgcatgtgggacagattggttttcaataaaataagagaaaaacttggaggacgg
gtccgttttatgggttcaggtgcttcacctttgtctcccgatgtcatggattttttgagg
gtatgctttggtggtcgaatgcttgaaggttatggaatgactgagacttcttgcattata
agtgcaatagatgagggtgataggttatccggccatgtgggctctcctaatcctgcttgt
gaaataaagcttatggatgttcctgaaatgaattacacctctgatgatcagccctaccct
cgtggtgaaatctgtgttaggggacctattgttttccagggctactacaaagatgatgtg
cagaccaaagaagtgattgacgagaaaggttggctgcatacaggagacatagggttgtgg
ttgccaggggggcgcctgaagattattgataggaaaaagaacatttttaagttggcacag
ggcgagtacattgcacctgagaagatcgagaatgtttatgccaagtgcaaatttattacc
cagtgttttatatatggtgacagcttaaattccagtttagtagcaattgtctcagttgac
caagatactttggaggcttgggctgcatctcaaggcatccagtatgaagatataaaacag
ctctgcaatgacccaagagcaaggatagcagtcttggctgacatggatggcatcggaagg
gaagctcagttgagaggtttcgaatttgcaaaagctgtaactttagtgccagaaccattc
actttggagaacggtctcctcactccgacattcaaggcaagtaacctgttctga
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