Magnolia sinica: 131231858
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Entry
131231858 CDS
T09699
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msin01009
]
131231858
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131231858
Enzymes [BR:
msin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
131231858
Protein phosphatases and associated proteins [BR:
msin01009
]
HAD phosphatases
Fcp/Scp phosphatases
131231858
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
131231858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
131231858
NCBI-ProteinID:
XP_058084154
LinkDB
All DBs
Position
17:complement(73306416..73330065)
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AA seq
968 aa
AA seq
DB search
MFKSAFYHGNSLLGEVEIYPKNPNIDIPNKEIRISHFSPPSERCPPLAVLHTIAAGGACF
KMEQSKPPLSEQSEESSPFFSLHTACLRENKTAIMQLGEEELHLVAMSSRKNLEQYACFW
GFNVMPGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRI
SGMLAEVKRYQDDKVILKQYAENDQVVENGKVIKVQSEIVPPLSDNHQPIIRPLIRLQEK
NIILTRINPVIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLD
PDSNLINPKELLDRIVCVKAGLKKSLLNVFQDGICHPKMALVIDDRLKVWEDKDQPRVHV
VPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDDVLLQWISDAFYEDEMIDFP
PAPDVSNYLVSEDDASASNGNKDLLSFEGMTDVDVERRLKDANVQALQVSSAVNNIDPRL
ASSIQHVLASSSSMIPQTSQGSISFQNIQYPQAIPTVKPLGLVGPPEPSLQSSPAREEGE
VPESELDPDTRRRLLILQHGQDTREQTSNDPPFPVRPALQISMPPVQSHGSYFTMEEEMS
PRKMNRAREFPIEPEALHFDKNRSPHPSFYHGLENSLPPTRSLHENQRFPKELRHGDDRF
RPNHPLPNYHSSGDEMPLGRTSSGNRNLHFESGRVTAQYPETPAGVLQEIAMKCGTKVIG
WFCCNIEVVEFRPALAATTELQFSIEVWFVGEKIGEGIGKTRKEAQRQAAEGSLRTLANK
YISRVSPDLNAVHGDSNKLSHKNDNGFLRDANSFGYPAFPREDPLPIASTSDQSRFLDQR
QEGSLKGMAPVSSLKELCMVEGLSLVFHAQPPLSTLSSHKGEVYAEVEIAGQILGKGIGL
TWEEAKLQAAEEALGGLKFMLSQGSQERLGSPRSSHGIPNKRLKTEYPRTLQRVLSSTRY
SKNGPPVP
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatcggctttctatcatgggaattccctccttggggaggttgagatataccca
aagaaccccaacatcgacatcccgaacaaggaaatccggatctcacatttcagccctcca
agtgagaggtgcccgcctttggcggtcctccacaccatcgccgcaggcggtgcttgcttc
aaaatggaacagtcgaagccgccgctgtcagagcagtccgaggaatcgtcgccgttcttt
agtttgcacaccgcttgtctcagagaaaacaagacggcgatcatgcaactaggagaggag
gagctgcatttggtggccatgtcttctaggaagaatcttgaacaatatgcatgtttttgg
ggttttaatgtcatgccagggttgtataattcttgtcttgtcatgctgaacttgagatgc
cttggcattgtgttcgatcttgatgaaacacttatagttgccaacacgatgcgctcgttt
gaggaccgaattgatgccctacagcgaaaaataaatagcgaggttgacccacaacgcatt
tccggcatgttggctgaggtcaagcggtatcaggatgacaaagtcatcttgaagcaatac
gcagaaaatgaccaggttgttgaaaatgggaaggtgatcaaagttcaatccgagatcgtc
ccaccattatctgacaatcatcaaccaatcattcgtcctctcataaggttacaagagaag
aatatcatattgacccgcataaatcctgtgattcgtgataccagtgtccttgtaaggcta
aggcctgcatgggaggatcttcgtagctacttaattgcaagaggccgcaagcggtttgag
gtgtatgtttgcacgatggcagaaagagattatgctctagaaatgtggaggcttcttgac
ccagattcaaatttgatcaacccaaaagaattattggatcgcattgtctgtgtcaaggct
gggttaaaaaaatcattgctgaatgtctttcaagatggaatctgccatccgaagatggca
ttggtgattgatgatcgtctgaaagtgtgggaggataaagatcaacctcgagtccatgtc
gttccagcatttgccccatactatgctcctcaagcagaggcaaataatgctgtcccagtt
ttatgcgttgcaagaaacgttgcatgcaatgttagaggtggttttttcaaagaatttgat
gatgtgcttttacaatggatttctgatgcattctatgaagatgaaatgattgattttcct
ccagctcctgatgtgagcaattatctagtctcagaggatgatgcttctgcttcaaatgga
aacaaggacctgctatcttttgagggcatgactgatgttgatgttgaaaggagattgaag
gatgcaaatgtccaagctcttcaagtttcttctgcagtcaataatattgacccaaggctt
gcatcttctatccagcatgtgctggcttcttcatcgagcatgattccacagacttctcaa
gggtcgatttcttttcagaatatacaataccctcaggctattccaacagtcaagccgctg
ggccttgttggccctccagaacctagcttgcaaagttctcctgctagagaagagggggag
gttcctgaatctgaattagatcctgacacaaggagaagacttctcatattacaacatgga
caagacacaagagagcaaacctcgaatgatcctccgtttccagtccgccccgctctacaa
atttcaatgccaccagtgcaatcacatggaagctatttcacaatggaagaagagatgagt
ccgagaaaaatgaacagagccagggaatttcctatagagccagaagctttgcattttgat
aagaatcgatctcctcatccatctttctatcatggtctggagaattctcttcctcctact
agatctcttcatgaaaatcaaagatttccgaaagagttacgtcatggagacgaccgattc
agaccaaatcatcctcttccaaattatcattcctcaggtgatgagatgcctttgggtcgg
acatcttctggcaacagaaatcttcattttgaatctggacgagttacagcacagtacccc
gaaacgcctgctggagttctacaagaaatagcaatgaagtgtggaacaaaggttattggg
tggttttgttgtaacatcgaagttgtggaattcaggccagctttagctgctaccacagag
ttacagttttcaattgaggtttggtttgttggagaaaaaataggtgaggggattggtaaa
acaaggaaggaagcccaacgtcaagctgctgagggctcccttaggactttggccaataaa
tatatatcaagagtttcgcctgatctgaatgctgtgcatggggattcaaataagctttcc
cataaaaacgacaatggttttttacgtgatgcgaattccttcgggtatccagcattcccc
agggaggatcccttgccaatcgcaagtacatcagaccagtccaggtttctggaccagagg
caggagggttctctgaaaggaatggctcctgtttcatccctcaaagaattatgcatggtg
gagggtcttagtctagtttttcatgctcagcctccactttcaacgttgtccagccacaag
ggagaagtgtatgcagaggttgaaattgcaggccagattttaggcaaaggaattgggttg
acatgggaagaagccaagctgcaggctgctgaagaggcccttgggggtctaaaattcatg
ctgagtcaaggttctcaggaacgcttgggttctccaaggtcatcgcatggaattcctaat
aaacggctgaagactgaatacccacgaacattgcagcgagtgctgtcctccacaagatat
tccaagaatggtcctcccgttccttga
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