Magnolia sinica: 131231876
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Entry
131231876 CDS
T09699
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
msin
Magnolia sinica
Pathway
msin04144
Endocytosis
msin04145
Phagosome
msin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131231876
04145 Phagosome
131231876
04148 Efferocytosis
131231876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131231876
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131231876
04031 GTP-binding proteins [BR:
msin04031
]
131231876
Membrane trafficking [BR:
msin04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
131231876
Endosome - Lysosome transport
131231876
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131231876
Exosomal proteins of other body fluids (saliva and urine)
131231876
Exosomal proteins of colorectal cancer cells
131231876
Exosomal proteins of bladder cancer cells
131231876
GTP-binding proteins [BR:
msin04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
131231876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
ATPase
DUF6806
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
131231876
NCBI-ProteinID:
XP_058084197
LinkDB
All DBs
Position
17:55510125..55574219
Genome browser
AA seq
200 aa
AA seq
DB search
MGCSSSLPDRSSGRLGGLNTENSGAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPES
FNKAQYWVKELQKHGSPDIVMALVGNKADLQENRKVTVQDAVEYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRTPSS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctcctcctcacttcccgataggagttctggacgtttgggtggattgaacact
gagaactctggagctgctgactcaaaaaacttacgggtgaagttggtgctgttgggagat
tcaggtgttggtaaaagctgcatcgttcttcgctttgtccgtgggcagtttgacccaaca
tccaaggtaactgttggtgcatcattcttgtcgcaaacaatagctttgcaagattctaca
actgttaagtttgaaatatgggatactgctggccaggagaggtacgctgctttggcgcct
ctttactatcggggagcagctgtggcagttattgtgtatgatataacaagccctgagtca
tttaataaagcacagtactgggttaaggaactacagaaacatggtagccctgatatcgtc
atggctttggtgggtaacaaggctgatcttcaggaaaatcggaaagtaactgtccaagat
gcagtagagtatgcagagaagaatggaatgttttttatagagacatctgcaaagacagct
gataatattaatcaactgtttgaggaaattgcgaagcggctgccacggactccctcttcc
tga
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