KEGG   Magnolia sinica: 131231876
Entry
131231876         CDS       T09699                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
msin  Magnolia sinica
Pathway
msin04144  Endocytosis
msin04145  Phagosome
msin04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:msin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    131231876
   04145 Phagosome
    131231876
   04148 Efferocytosis
    131231876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msin04131]
    131231876
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msin04147]
    131231876
   04031 GTP-binding proteins [BR:msin04031]
    131231876
Membrane trafficking [BR:msin04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    131231876
 Endosome - Lysosome transport
    131231876
Exosome [BR:msin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   131231876
  Exosomal proteins of other body fluids (saliva and urine)
   131231876
  Exosomal proteins of colorectal cancer cells
   131231876
  Exosomal proteins of bladder cancer cells
   131231876
GTP-binding proteins [BR:msin04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    131231876
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase DUF6806 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 131231876
NCBI-ProteinID: XP_058084197
LinkDB
Position
17:55510125..55574219
AA seq 200 aa
MGCSSSLPDRSSGRLGGLNTENSGAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPES
FNKAQYWVKELQKHGSPDIVMALVGNKADLQENRKVTVQDAVEYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRTPSS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggctgctcctcctcacttcccgataggagttctggacgtttgggtggattgaacact
gagaactctggagctgctgactcaaaaaacttacgggtgaagttggtgctgttgggagat
tcaggtgttggtaaaagctgcatcgttcttcgctttgtccgtgggcagtttgacccaaca
tccaaggtaactgttggtgcatcattcttgtcgcaaacaatagctttgcaagattctaca
actgttaagtttgaaatatgggatactgctggccaggagaggtacgctgctttggcgcct
ctttactatcggggagcagctgtggcagttattgtgtatgatataacaagccctgagtca
tttaataaagcacagtactgggttaaggaactacagaaacatggtagccctgatatcgtc
atggctttggtgggtaacaaggctgatcttcaggaaaatcggaaagtaactgtccaagat
gcagtagagtatgcagagaagaatggaatgttttttatagagacatctgcaaagacagct
gataatattaatcaactgtttgaggaaattgcgaagcggctgccacggactccctcttcc
tga

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