Magnolia sinica: 131231923
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Entry
131231923 CDS
T09699
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131231923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131231923
03036 Chromosome and associated proteins [BR:
msin03036
]
131231923
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131231923
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131231923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
131231923
NCBI-ProteinID:
XP_058084287
LinkDB
All DBs
Position
17:complement(647640..660816)
Genome browser
AA seq
1142 aa
AA seq
DB search
MGSYISSSLAALNPLPKSKKKGNSRRKILRNSTSFYLPCPKKSRKISIRVNQTRHGAFGQ
SSSSPFGTQSVFGQTNNASSNPFAPKPFGNTSPFGSPTGGSIFGGTSTGVFGVTQSSSPL
ASTPAFGASSTLGFGGSMPAFGASSTPAFGSASSTPAFGSASSSFGGSSLFGQKSTFGGF
GSTSSQTSPFGSAFQQAQPAFGSNLFGSTPAFGATGTPAFGATSTPAFGATSTPAFGTTG
TPAFGAASTQAFGSTATPTFGSTGTAFGVSSAPAFGSTGTPAFGSTGTPAFGASSTPLFG
SSSAPAFGASSTPAFGSSASAFGASSTPSFSFGSSPAFGQSTSAFGSSPFGTTPSPFGVQ
SSPFASQATTPTFVSPGFGQSAFGGQHGGSRVAAYTPTAEVDGGTSTQPAGKLESISAMP
SYKDKSHEELRWEDYQRGDKGGPNPTGQPAGGIFSAPSQSNPFGPTGTFGQTPANPFSST
SSNPFAQKTPTFGNTGFGSSSTPAFNSPFGTSSSSPFRATSTPTPSIFGAPSAPAFGASS
SPSPFGASSMPSIGSSPSLFGSSSAPGTGPAFGSSFGTQSSGLFQSSTPSLGQMAPAFVQ
TPLFGQTTPPAFGQTNLFNPQSTGFGGNSFTSNPLPSLLGTNNPVGFGQTIQPSLSSAIQ
LGAPAQSSGAFSFGNFGQTSAASSGFGGTSNVFGQGTFGQFAASQNNVIAQPVPVENPFG
TLPAMPQMSIGRAGSAPSVQYGISSMPVGNKPTLVRVSPLLTPRHLSQRRIRLPARKYHP
RNDGLKVPFFSDDEETPSTPKADALFIPRENPRALVIRPMDQWPTRSSAEKQSPLKDTDA
PVHQNGVSLKKRYDIFKAKCGKRKKSRGHKNMGHAVLLVVGSIISGEASAPALNGSFSQD
HDVSPSENGLDSQQNVSPAKSTQKPQGTHEDHAHKGNSYITISGHRAGEAAIVYEHGADI
EALMPKLRHADYYTEPRVQELAAKERAEPGYCRHVKDFVVGRHSYGSIKFLGVTDVRRLD
LESLIQFNNREVIVYMDENKKPPIGQGLNKPAEVTLLNIKCINKKTGEQYTEGPKVEKYK
EMLMKKTQDQGAQFISYDPVKGEWKFNVDHFSRYEFCDIEDFCASFFSNCNLCLCSISDC
KK
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgggtagctatatttcttcctctctagctgctttaaaccctctcccaaaatcaaagaaa
aagggaaattcaaggaggaaaatcctcagaaattctaccagtttctatcttccatgccct
aaaaaatcccggaaaatttcaattcgcgtcaatcaaacgcgacacggagcattcgggcag
tcatccagtagcccatttgggacccaatcagtttttggccagacaaacaatgccagtagc
aatccattcgctcccaaaccctttggcaatactagtccttttggatctccgacaggtggt
tcgatatttggtggcacatcaactggtgtgtttggagtgacacagtcttcttcacctcta
gcttctacacctgcatttggtgcttcatcaacactaggttttggtggctcaatgcctgct
tttggggcttcatcgactcctgcatttggtagtgcttcatcaactcctgcatttggtagt
gcttcgtcttcttttggtggatcttctttatttgggcagaagtctaccttcggtggcttt
ggatcaacttccagtcaaactagtccctttggtagtgcatttcaacaagcacaaccagca
tttgggagcaatctgtttggttccacacctgccttcggtgcaacaggcaccccagccttt
ggtgcaacaagcactccggcctttggcgctacaagcactccagcctttggcacgacaggc
accccagcttttggtgcagcaagcacccaggcttttggatctacagcgacaccaacattt
gggagcacaggtacggcatttggagtgtctagtgcaccagcatttggttctactggtaca
ccagcattcggttctactggtacaccagcattcggtgcttcgagcacacctctttttgga
tcttcaagcgcccctgcatttggtgcttcaagtactcctgcatttggttcttctgctagt
gcttttggtgcttcaagtacaccttcttttagttttggctcctcacctgccttcggtcaa
tctacttctgcgttcggtagctcgccatttggaactactccgtctccttttggtgtccag
agttctccctttgcgtctcaggcaacaacaccaacattcgttagccccggttttggccaa
tcagcttttgggggtcaacatgggggaagtagggttgcagcttacacgccaaccgctgag
gtagatggtggcactagtacgcagcctgctggaaagcttgaatcaatatcagctatgcct
tcatacaaagacaagagccacgaggagttgagatgggaggattatcaacgtggagataaa
ggggggccaaatcctactggtcagcctgcaggtgggattttttctgcaccaagtcagtca
aatccgtttggtccaacaggcacatttggtcagacacctgcaaaccccttctcctctaca
tcttccaaccctttcgctcaaaaaacaccgacatttggtaatactggatttggttcatca
tccactcctgcattcaactcaccatttggtacatcctcatcgagccctttcagggcaacc
tctaccccaactccatccatatttggggcaccctctgcgcctgcatttggagccagctct
tctccatctcccttcggtgcatcaagcatgccttcaattggctcttcaccttcacttttt
ggttcttcttcagcaccaggaacaggtccagcatttggttctagcttcggcacccagtca
tctggattattccaatcttctactccttcccttgggcagatggcacctgcttttgtacaa
acccccttgtttggacagacaaccccccctgcatttggtcagacaaacctattcaaccca
caatcaactgggtttggtggaaattcgttcacaagcaatccattgccatcactacttggt
accaacaatcctgtgggttttggtcaaacaattcagccttctctttctagtgctattcaa
ctgggtgcacctgctcagtcatcaggcgccttttcctttggcaactttggtcagacatca
gcagcttcaagtggctttggcggcacatcaaatgtttttggtcagggtacctttgggcaa
tttgctgccagtcagaataatgtgatcgcgcaaccagtgccagttgaaaacccatttgga
acactccctgcaatgcctcaaatgtcgattggtcgtgctggctcagcaccctctgtccaa
tatggaatttctagcatgcctgttggcaacaagcccactcttgtcagagtttcaccctta
ctgactcctaggcacttgtctcagagaaggattaggttgccggcaaggaaatatcatcct
agaaatgatggtctgaaggtgccattcttcagtgacgatgaagaaacaccaagtacgcca
aaggcggatgctcttttcattcctcgggagaatccaagggcactggttattcgtcccatg
gaccagtggcccacaagatctagtgcagaaaagcagtctccattgaaagatacagatgca
ccagttcatcaaaatggcgtttccttgaaaaaaagatatgatattttcaaggccaaatgt
ggaaaaaggaaaaagtctcgagggcataaaaacatgggccatgctgtacttctagttgtg
ggtagtataatctctggggaggcatccgctcctgctttaaatggttccttctctcaagat
catgatgtgagtccatcagaaaatggccttgatagccaacaaaatgtttctccagccaag
tccacacaaaagccacaggggacccatgaagatcatgctcacaaggggaattcttacatc
acgatctcaggccacagagctggcgaggctgcaattgtgtacgagcatggtgccgacatt
gaggctctcatgccaaaactgcgtcatgccgattattacacagagccccgggtccaggag
ctggcagccaaagagcgggctgagccaggctattgccgccatgtgaaggattttgttgtc
gggcggcacagttatggcagcataaaattcctaggagtgaccgacgtgcgacggctcgat
cttgagtccctcattcagttcaacaaccgtgaggtgatcgtgtacatggacgagaacaag
aagccccccataggacaaggcctcaacaagcctgcagaagtaacactcctcaatataaaa
tgcatcaataagaagacgggagagcagtacacagaagggcccaaggttgaaaagtataag
gagatgctgatgaagaaaactcaagatcaaggtgcccagtttatttcttatgacccagtc
aaaggggagtggaagttcaacgttgatcacttcagccggtatgaattctgcgacattgag
gatttttgtgcaagcttcttttcaaattgcaacttatgtttgtgtagcatttcagattgc
aagaagtaa
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