Magnolia sinica: 131231952
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Entry
131231952 CDS
T09699
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131231952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131231952
Enzymes [BR:
msin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
131231952
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
131231952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
MTPAP-like_central
NTP_transf_2
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
131231952
NCBI-ProteinID:
XP_058084353
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All DBs
Position
17:3701276..3709800
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AA seq
561 aa
AA seq
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MAYAYPNQRRILVPGPQFVDPRTAIHPSGFLPTPFGVINPSFRLPVPPVEVLVPNGPPVF
APVRFALNPAVLIRMDEQRTQSLLQFMAKEGLVPSPEEESKRRDAIVELKKIVVAWVKKV
AWQRRLPKNQIASTCATILTYGSYGLGVHGSESDIDALCVGPIYATMAEDFFIVLRNMLQ
SRPEVSELHCVKSAKVPLMRFKFNGISIDLPYAQLSVISVPENVDILNPFFLQNIDETSW
RSLSGVRANIRLLQLVPNLENFQSMLRCIKLWARRRGLYSHLLGFFGGIHLAILSAHICQ
RHPNASISALISIFFDTFSRWPWPSPVTLQDGSIPYRDVSDGRSFMPIMMPCSPYDWCNT
NITRSTFNRIRTEFNRGHNMTRDLGKPDFEWSDLFDPFPFTKRYTRFVRIFLAAPDEDEL
RDWLGWVKSRFRNLLQKLEEVQGYCDPNPTEYVDHEVAEPNTVFYWGLSPNRSSFTDIDS
VKEEFMKSVDNGYQGSACRLELSIVNASQLPKNAQIDWGNGNMSKAYWRISDYIQQRPPV
YSQHLPYYFVGYAAAATDRSE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgcttatccgaatcaaaggaggatcttggtgcctggacctcaattcgtcgat
ccacggactgcgatccacccatctggttttctccccacgccgtttggcgtcataaaccct
agttttcggctcccggtcccgcccgtcgaggttttagttccaaacggtcctccagttttc
gctccggtccgattcgctttgaatcccgctgtcttgatccggatggacgagcaaagaaca
caatcgctgcttcagtttatggcaaaagaaggactcgtgccatctccagaagaggaatca
aagaggagagacgcgattgtggagcttaagaagattgtagtggcatgggtaaagaaggta
gcttggcaacggcgacttccaaagaatcagatagcaagcacttgtgcaacaatattgact
tatggctcctatggcttgggagttcatggatcagaatcggatatcgatgctttatgtgtt
ggcccaatctatgcgacaatggcagaggacttttttattgttctgcgcaatatgcttcaa
agtaggccagaagtatcagagcttcactgtgtcaagagtgcaaaagttcctttaatgcgt
ttcaaattcaatgggatctcaatagatcttccgtatgcccaactttcagtaatttcggtt
cctgagaatgtggacatcctcaacccattcttcttacagaacattgatgaaacaagttgg
agaagcttgtctggtgtacgtgcgaatatacgtctccttcagcttgtcccaaacttggag
aatttccaatcaatgctgcgatgcattaaactatgggctaggaggcgaggactttattct
catttacttgggttttttggagggatccacttggcaattctttcagcacatatttgtcag
agacatcctaatgccagtatcagtgctcttatctcaattttcttcgatacattttctcgc
tggccttggccctcacctgtgactctgcaagatggatcgattccatatagggatgtttct
gatgggcgctccttcatgcctattatgatgccatgtagtccgtatgactggtgcaacact
aatatcacaagaagcacatttaacaggatcagaacagaattcaatcgcgggcataatatg
acaagggatcttgggaagccggattttgagtggagtgatctatttgatcctttcccattt
acaaagagatacacacgttttgtaaggattttcctcgcagctccagatgaagatgagttg
agggattggctgggttgggtgaagtcacgctttcgaaatcttcttcagaagctggaggaa
gttcagggatattgtgatcccaatcctacagagtatgttgatcatgaagtagctgagcca
aacactgtattttattggggtttatcacccaacaggagcagcttcaccgatattgactct
gtcaaagaagagttcatgaaaagtgtggacaacggctatcaaggttctgcttgcaggctc
gaactttccattgtcaacgcctcccagcttcccaaaaatgcacaaatcgattgggggaat
ggaaacatgtcgaaagcctattggagaatttctgattatatccagcagagaccgcctgtt
tattctcagcatttaccgtattacttcgtcgggtatgcagcagcagctactgatagaagc
gagtaa
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