Magnolia sinica: 131231959
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Entry
131231959 CDS
T09699
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131231959
03400 DNA repair and recombination proteins [BR:
msin03400
]
131231959
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131231959
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131231959
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
131231959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
UBA_7
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
131231959
NCBI-ProteinID:
XP_058084364
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All DBs
Position
17:12811745..12871275
Genome browser
AA seq
918 aa
AA seq
DB search
MDGNDISSDHVIAELIDMGFEFPKAIEAIKAVGPCLHDAVEFILKGGSCKNKTGQNLNHE
RSSTLYNCSTSQASTFGKRTSSSFPRDRLKQSSISGHLHSGKAKKSKPGGVSDVSTSILE
GSDSRHMEESKFSPHMNCKPEPATESSQPKSNVPMPIVKLEQENGSSQYSSCNQAIGTDW
EHKVNILLQKHFGFSPLKSFQKEALEAWLANRDSLVLAATGSGKSLCFQIPAMLTGKVVV
VISPLISLMHDQCLKLAKHGVSACFLGSGQTDRSVEHKAMSGMYGVVYDCPETVLRLIEP
LQRLAENRGIALFAIDEVHCISKWGHDFRPDYRRLSVLRENFKASSLKSLEFDIPLMALT
ATATIHVREDILKSLCMSKETKIVFTSFFRPNLRFSVKHSRTSRAASYDKDFRELIDTYT
TERVIGYREPGTILPDSKDDSDSSSRSANDSASDVDETSPYNFENFYDDHDDGSCAEVSS
ANENVVAASKENQLSVEYLEDELDICQGVDDLDVACGEFDGNSLSENRDFYVSSGTLNAT
TKPERVDVQEPLGQGPTIIYVPTRKETLRIAQYLSSFGVQAAAYHAKLPKTHLRRVHEEF
HQNILQVVVATIAFGMGIDKSNVRRIIHYGWPQSLESYYQEAGRAGRDGKLAECNLYADL
SRIPTLLPSQRSEEQAKQAYKMLSDCFRYGMATASCRAKILVNYFGEDFSYDKCLLCDIC
AGEPPKLQNMKVEADAFMRVLAAQCVSGSTSYRSYCFDDGIYGDAKRGRFIERPNFKMLV
SRLREQFPKFAASDQLWWQGFVRILEEKGYIREGDGMVRVCIKYPEPTDLGLRFLDSRTD
EDFYAYPEADMLLSMQIQKPYSSFSEWGRGWADPEIRRQRLQGRRYGRKKRKRRSSRRTQ
DLRTVRGRLEAKLSKPKH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaatgacatatcctccgatcatgtcattgctgaactgattgacatgggattt
gaattccctaaagctatagaagccatcaaagccgtcggaccatgcctccatgatgcggtt
gagttcattttgaagggtggttcttgcaaaaataaaacaggtcaaaatttgaatcatgag
aggtcatcgactttatataattgttctaccagccaagcaagcacttttggtaaaaggact
tcgtcttcatttcctcgggaccgtctgaaacagtctagcatcagcggacatctccattca
ggtaaagcgaagaaaagcaagcccggtggcgtttctgatgtttccacttctatcttagag
ggttctgactctaggcacatggaagaaagtaaattctctcctcatatgaattgtaagccg
gagcctgcaactgaatcatctcaacccaaatcaaatgttcccatgcctatcgttaagttg
gagcaggagaatggcagttcacagtatagctcatgcaaccaagcaatcgggacagactgg
gaacataaagtcaatattcttttgcagaagcattttggattttcacccttgaagagtttc
cagaaggaagccctagaggcttggttagcaaaccgagattctcttgttcttgctgcaaca
ggatctggaaaatctctctgctttcagattcctgcaatgttaactggaaaggtggttgtt
gtaatttcacccttgataagtttgatgcacgatcaatgtctaaaactagcaaaacatggg
gtgtctgcttgcttccttggatctggacaaactgaccgtagcgttgagcataaagcaatg
agcggcatgtacggggttgtctatgattgccctgaaacggtattgagactcatagaacca
ctccagaggcttgcagaaaatcgcggaattgcactttttgccattgatgaagtccattgt
atctccaagtggggtcatgatttccgacctgattacaggcgtttatctgtattgagagag
aatttcaaggccagcagtttgaaatctttagagtttgatataccactgatggcattgact
gctactgctacaatccatgttcgagaagacattctcaagtcattgtgcatgtcaaaggaa
acaaagattgttttcacttcattcttccgaccaaatcttcgattttccgtgaagcatagt
aggacgtctcgtgcagcatcttatgacaaggactttcgtgaattaatagatacttatacc
acagaaagagttataggttacagggaacctggtaccattttacctgattcgaaggatgac
tctgacagctccagcagatctgcaaatgatagcgcatctgatgtggatgaaacatctcca
tacaattttgagaatttttacgatgatcatgatgatgggagttgtgctgaagtaagttca
gcaaatgaaaatgttgtagctgcttctaaggagaatcaattgtctgttgagtatctagaa
gatgagctagatatctgtcagggagttgatgatttggatgttgcttgtggtgaattcgat
ggaaattctctttctgaaaaccgggatttctatgtgtcatctgggacactcaatgcgaca
accaaaccagaaagagtggatgtacaagagcctttgggacaaggtccaactatcatttat
gtgcccacaagaaaagaaacattaagaatagcacagtatctgagtagttttggtgtacag
gctgctgcttatcatgcaaagttgccaaaaacacatctgaggcgggtccatgaggagttc
catcagaatatattgcaggttgtagttgcaacaatcgcttttggaatgggaattgacaag
tcaaatgttagaagaatcatccattatggttggccacagagtttggaatcatattaccaa
gaagcaggtcgagctggaagagatgggaaattggcagaatgcaatctttatgcagacttg
tcaagaatacctacgcttttgccgagtcaaagaagtgaagaacaggcaaaacaagcatat
aaaatgttgtctgattgttttagatatggcatggctacagcgtcttgtcgagctaagata
cttgtaaactacttcggggaggattttagttatgacaagtgcctcttgtgtgatatctgt
gctggtgagcctcctaaattgcagaatatgaaagtggaggcagatgctttcatgcgggtt
cttgcagctcaatgtgtgagtggatcaaccagttacagaagctattgttttgatgatgga
atatatggtgatgctaaaagaggaagattcatagagagaccaaacttcaagatgctggtt
agtagactaagggaacagtttccaaaatttgctgcaagcgatcaactatggtggcaaggg
tttgtgcgcattttagaagagaaggggtatataagagaaggggatggcatggttcgggtt
tgtataaaatacccagagccaacagacttgggattgaggtttttagactcaagaacagac
gaagatttctatgcatatcctgaagcagacatgctcctctcaatgcaaatccagaaaccg
tattccagcttttctgaatggggacgaggatgggctgatcctgagatacgccgccaacgc
ctgcaagggagaagatatggaagaaagaagcggaagagacgctcgagcagacgtacacag
gatctaagaacggtccgaggaaggctagaagcaaagctatcgaaaccgaagcactaa
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