Magnolia sinica: 131232347
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Entry
131232347 CDS
T09699
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131232347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131232347
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131232347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Agenet
LEA_5
Motif
Other DBs
NCBI-GeneID:
131232347
NCBI-ProteinID:
XP_058084564
LinkDB
All DBs
Position
18:33787410..33810479
Genome browser
AA seq
1450 aa
AA seq
DB search
MTAILVLIERWKIERPKKEKRKSTPVSLPLTFFRRRRRRRRNLTHPYSAFEAFLHGSWWK
IKHVKIKGGSIIVQYEHHGLVVEEKVTISHLRICSRKASVSDCRCFLRFGMDVCVFSAYP
NAVSSDEENLQTAWHDAKIISIERKPHASQCTCQFSVIFYRYQDQVGMRKRKLVGGVEKV
SIDDIAILQKLGQKSDQSRRYQCSFSEDCSFVDKSKLPGGMYISEISWLLVLSSLNGMDF
DIRSIGSKMEYLIVNGDHGPSDGGAEQSVKDDDHASEDNKCKNQDVFPLGSNANVKVITF
QRNNGISQPMIETFAPVVPASIVEAAPIHDLLETDEMYDLVELRRSKRRRIMPDRYNGYS
SLPHTKCFSAREVTPKGEDVSPQADKDISEQGTHPKEKPIGENVAQISKGSSDKKFRDTQ
DKTQLRQGNSGPANLQQNHLSENHEKGTRTRREKMGDENIPREVQDSFHPHNGNKKNHII
HGDILDTSHPTCSENTLGFFVRNNAFSTPKMTEKCPDKLHDTNQGGRQVEVQANHVNKTG
KNCHKQHRSRGASKTKTKKTPETKDTELHSRHRNVPNATESRTKLKSSNTEIQRENRPSL
NRSKKKRPHRKHQGLTEFSSPHKKRRCSERKRHLEPGIEKRYCSERKRHCEPGIDRQRFC
SMNEWKQIMERRMQNIKCETKKQHPCVVSQWEANRVVNVSDTWWEFNWMAEVDDPIETLE
NEDLWEDMENSMVAFNSLNAHQDSSIESSDVFRKSSCKGDRQPCQHEYKLDEEVGIVCLL
CNVVKTEIRYVSPPFLQKEVMIRTEDKCDGVKTEWDGNYNTYATNADPFLNATSLNDVKL
EHYKSVWALIPDFKMKLLDHQKKAFEFLWKNIAGSLNPRDMECMSKKCSGCVISHSPGTG
KTLLVISFLISYLKLFPRKRPLILAPKTTLYAWYKEFEKWDVSIPIYQIHAVKHYRNEKR
KCKIKESVGDLKLSEAMMHLTDCLEKLWKWHEHPSILLMSYSSFFYMTREDSKVEHRRYM
AGVLRQSPGILILDEGHNPRSTKSKLRRVLMEVKTDLRILLSGTLFQNNFEEYFNTLCLA
RPAFISEMAREFNLRITVNGSGGRRKGKKITSSQTEMLARRTFVEQIARSINSSIDEERK
WGLSVLKKITNVFIDVYNGGTLDRLPGLQCYTLLMKSTDVQERILSKLDKLTTRRCCLEL
ELLITAGSIHPWLIKAFTCARKYFSMDELEELERYRHDVKKGPKMLFVVDLMHQCIVKRE
KVLIFCRNIPPIYLFVEIFKSVFGWQKDKEVLVLQGDQDLITRSKVMDKFKEAGGTSRVL
LASTTACAEGISLTAASRVVLLDPEWNPSKTKQAIARAFRPGQERVVYVYRLMASGTLEE
EKYNRNELKERQSRMIFTDGCVEDSYRKTENIDDHFLRELVEADRNKTFKMIMKHEKVCS
NVGKGNEELR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaatcctcgttctcatagaaagatggaagatagaaaggccaaaaaaggaaaaa
agaaaaagtactcctgtatcactgccgctcacgtttttccggcgtcggcgtcgacgtcgc
cggaatctgacacacccctattcagcatttgaggcatttcttcatggctcttggtggaag
attaagcatgtgaaaatcaaaggagggagtattattgtgcaatacgaacaccatggactt
gtggtagaggagaaagtcactatcagccaccttcgaatatgttcaagaaaagcaagtgtg
tctgattgcagatgcttcttgaggttcggtatggatgtgtgtgtattttcagcctatcca
aatgcagtaagttcagatgaagaaaatttacaaacagcatggcatgacgctaaaataatt
tcgattgagaggaagcctcatgcatctcaatgcacgtgccagttttctgtaatcttctac
agatatcaagaccaggttggcatgagaaagcggaagcttgtaggtggtgttgaaaaagtt
tcaattgatgatattgccatccttcaaaagctcggccagaaatctgatcaaagcagacgc
taccagtgcagcttctctgaagactgctcttttgtagataaaagcaaactgcctgggggc
atgtatatctctgaaatttcatggttgcttgtgctatcttctttgaatgggatggatttt
gatataagatcgatcggaagtaagatggagtatcttattgtgaatggtgatcatgggccc
tctgatggaggggccgaacagtcagttaaggatgatgatcatgcaagtgaagacaacaag
tgtaaaaatcaagacgtgtttcctcttggctccaatgccaatgtaaaggtcataactttc
cagagaaacaatggaatttcgcaacctatgattgaaacttttgctcctgtggttccagca
agtatcgttgaggcagctcccattcacgatctgttggaaactgacgagatgtatgatctt
gtagagctgcgacgttctaaacgccgaaggataatgcctgatcgttacaacggctacagc
agtcttccacacacaaaatgtttctcagctagagaggttacaccgaagggagaggatgtg
tcacctcaggctgataaggacatttcagaacaaggaacccatccgaaagagaaacctatt
ggggaaaacgtagctcaaattagtaagggcagttctgataagaagtttcgagatacccaa
gacaagacccaactaaggcagggaaattcaggtccagctaacctgcagcaaaaccatctt
tctgagaatcatgaaaagggaacaaggacccgtagagaaaaaatgggagatgaaaacatc
cctagggaagtccaagactcttttcatcctcataatggaaacaagaagaaccacataatt
catggggacattctagatactagccatcctacatgtagtgagaacacgttgggattcttc
gtacgcaacaatgctttttcaaccccaaagatgactgagaaatgcccagacaagctgcat
gataccaatcagggtggtcggcaggttgaggttcaagcgaaccatgttaacaaaaccggc
aagaattgtcataagcaacaccgaagcagaggcgcttcaaaaacaaaaaccaagaaaaca
ccagaaacaaaagatacagagttacattccagacatcgtaatgtcccaaatgcaacagaa
agtagaacaaagctgaaaagttcgaatacagaaattcaaagagaaaatcggccttcttta
aataggtcgaagaagaaacgtccacatagaaaacatcaaggactaacagaattttcttct
ccacataaaaagaggcgttgttcggagaggaaaaggcatcttgagccaggtattgaaaag
aggtattgttcggagaggaaaaggcattgtgagccaggtattgacaggcaaagattctgc
agcatgaatgagtggaaacaaataatggagaggcgcatgcagaacatcaaatgcgagaca
aagaaacaacacccatgtgttgtttctcaatgggaagcaaatcgagtggtgaatgtgtcg
gatacatggtgggagttcaactggatggcagaagttgatgatcccatagaaactttagag
aatgaagatttgtgggaagacatggaaaattcaatggtggcattcaattccctcaatgct
catcaggactcgagtatagaatcctctgatgtgttcaggaagagttcatgtaaaggtgac
aggcagccatgccaacatgaatacaaattggatgaagaagtcggaattgtatgtctgcta
tgcaatgttgtaaaaactgaaataagatacgtctcgccaccttttttgcaaaaagaagtt
atgatcagaactgaggataaatgtgatggagtgaagacggagtgggatggaaattacaat
acttatgccactaatgcagatcctttcctcaatgccacttccttgaatgatgtcaagtta
gaacattacaagagtgtttgggctctaataccagacttcaagatgaaattgcttgaccac
caaaagaaagcatttgaattcctctggaaaaacattgctggatctttgaacccaagagac
atggaatgcatgtccaagaaatgtagtggttgtgtgatctcacattctcctggaacagga
aaaacactgctagtaatctcattcctcataagctacttgaaattgtttccaagaaagcgg
cctctcatacttgctccaaagaccacactttatgcatggtacaaagagttcgagaagtgg
gatgtatccattccgatttaccaaatccatgcagtgaagcactacagaaatgagaagcgg
aaatgcaaaatcaaagaatctgtgggggacctgaagctaagcgaagcaatgatgcatctt
acagattgcttagagaagctatggaaatggcatgaacacccaagcattctcctcatgagc
tattcgtctttcttctacatgacgcgtgaagactccaaagttgagcatcggagatacatg
gcgggagtcctaaggcaaagccccgggattctgatacttgatgaggggcacaacccaaga
agcacgaaatccaagttgaggagagtgttgatggaagtaaagacagatttgaggattttg
ctttctggaacgctattccaaaacaattttgaagagtacttcaacaccctttgcttggcg
agaccggcctttatctccgagatggcaagggagttcaatctaagaataactgtcaatggt
agcggtggaagacgaaaaggaaagaagatcactagcagtcaaacagagatgctagcaaga
agaacttttgtagagcaaattgcaagaagtatcaactcaagcatagatgaagagagaaaa
tggggccttagtgttttaaagaaaatcacaaatgtgtttatagacgtctacaatggcggg
accttggatagacttccgggcctgcaatgctatactctcctgatgaagtcgacggatgtg
caagaacggattctatcgaagttagataaattaacaacccgtcggtgttgtcttgagtta
gagctgttgatcactgctggatcaattcatccatggttgataaaagcattcacgtgcgca
cgtaaatacttcagcatggatgagttggaggagctcgagagatacagacacgatgtcaag
aaaggtccgaagatgttgtttgttgtcgacctcatgcatcaatgcattgtcaagcgggag
aaggtcttgatattctgtcgtaacatccctcccatctatctctttgttgagatattcaaa
tcagtgtttgggtggcagaaggacaaggaagtgttggtgcttcaaggcgatcaggacctg
atcacgcggtcaaaagtaatggacaagttcaaagaagctggtggtacatcacgagtcctg
cttgcatcgacaaccgcatgcgccgaaggcattagcctcacagcagcttcccgggtggtt
ttgctggacccagagtggaatccgtccaagacaaagcaagccattgctcgtgcattccgg
cctggacaagagagggtggtttatgtgtaccggctgatggcgtcagggacattggaagaa
gagaagtacaataggaatgagctgaaggagcgccaatcgaggatgattttcacagatggg
tgtgttgaggattcttacaggaagacggaaaacatcgacgaccattttctgagggagctg
gtagaggctgataggaataagacatttaagatgatcatgaagcatgagaaggtttgcagc
aatgtggggaaaggaaatgaagagctgcgctga
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integrated database retrieval system
