Magnolia sinica: 131232512
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Entry
131232512 CDS
T09699
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase isoform X1
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msin03016
]
131232512
Enzymes [BR:
msin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
131232512
Transfer RNA biogenesis [BR:
msin03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
131232512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
131232512
NCBI-ProteinID:
XP_058084780
LinkDB
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Position
2:complement(4961085..4971357)
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AA seq
452 aa
AA seq
DB search
MIFNVVRAGRFFCRFQQVVGSQIEVLPGFCFPKSASHLRTLVQRHEARRNVASAHSIIFD
IGCSKAFKKINMSSSLELLKGSQGFHSDVKSSIITDAVANVGGLPSVKLDEKSQDSLSAR
QDHTCSLSVQSTPDIERKYVHRVYDAIAPHFSSTRFAKWPKVASFLNSLVPGSVILDAGC
GNGKYLGLNPYCFYIGCDISTPLINICAERGHEVIVADAVNLPYRTGFGDAAISIAVLHH
LSTESRRRKAIEELIRVVRPGGLVLITVWAVEQEDRSLLAKWTPLLNKYDEEWIGSGSLR
VRSSPLTATLSTIPETEENSHLEVDELRRACNQNMLKDLAQQSKEETGVGVVSSRTEDGS
IASRDSDIKSHQEYFVPWHLPYHRAEISGASASALANGLAKKDDKKGAVVYNRYYHVFIK
GELERLVSGIQNAVISDQFYDKSNWCIILEKT
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatctttaatgttgtaagagcagggagattcttctgccgattccagcaagttgttggt
tctcaaatcgaagtccttccaggattttgcttcccgaaatcggcatcacatctgaggact
cttgtacaaagacatgaggctagaaggaatgtagcttctgctcatagcataatatttgat
atcggttgctctaaagccttcaagaaaatcaacatgtctagttctttagaacttctcaaa
ggcagccagggatttcattcagatgttaaatcctctattataacagatgcagtagccaat
gttggtggcttgccttctgtgaaattagatgaaaaatctcaggattctctgtcagccaga
caggatcacacatgttccttgagtgtgcagtccactccagacattgaacgtaaatatgtc
catcgtgtctatgatgctattgctccccatttcagctccacccgctttgccaagtggcct
aaggtcgccagctttttgaattccttggtgccgggttctgtcatcttagatgcaggctgt
ggtaatggaaagtacttgggcttaaatccttattgcttttacattggctgcgatataagc
actccgttgatcaacatatgtgcggaaagaggacacgaagttattgttgcagatgctgtc
aatcttccttatagaactggcttcggcgatgcagctatttctattgctgtcttgcatcat
ctgagcaccgaaagtaggaggagaaaagctatagaggaattgatccgggttgtacggccg
ggtggtttggttttaataacagtatgggctgtagaacaagaagataggtcgttgcttgca
aagtggaccccacttttgaacaagtatgatgaagagtggataggatcaggcagtcttcgt
gtgcgtagtagcccattaactgccactttgtcaaccatcccggaaactgaggaaaacagt
caccttgaggtggatgaattaagacgagcatgcaatcagaacatgttgaaagatttggca
caacagtccaaggaggaaacaggtgttggtgttgtatcttctcgaacggaagatggttct
atagcttctagagacagtgatatcaaaagccaccaggaatattttgttccttggcactta
ccctatcatcgagctgagatcagcggtgcatctgcttccgctcttgctaatggtctggcc
aagaaagatgataaaaagggtgcagttgtctacaatcggtattaccatgtattcatcaaa
ggcgagcttgaaaggttggtttctggtattcagaatgcagtcatctctgaccagttctat
gacaaatccaattggtgtataattctcgagaagacataa
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