KEGG   Magnolia sinica: 131232578
Entry
131232578         CDS       T09699                                 
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
msin  Magnolia sinica
Brite
KEGG Orthology (KO) [BR:msin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msin03036]
    131232578
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:msin04812]
    131232578
Chromosome and associated proteins [BR:msin03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     131232578
   Microtubules and associated factors
    gamma-tubulin ring complex
     131232578
Cytoskeleton proteins [BR:msin04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     131232578
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WD40 WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd EIF3I WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 NYD-SP28_assoc Beta-prop_WDR11_1st bZIP_2 WD40_like DUF6694 FUT8_N_cat
Other DBs
NCBI-GeneID: 131232578
NCBI-ProteinID: XP_058084877
LinkDB
Position
18:complement(14243391..14260094)
AA seq 790 aa
MMNLMDPSTALLAACGGDTVKLFDVSEGTGSSDPCTLSYVPSPGFQVNSVKWNHTNLVVA
SAGDDKKISLWRKNGQSMGTVPTSGSDVGDNIDESILAISFSNKGSRYLCSGGSSQIVRV
WDLQRKRCIKWLKGHTDTVTGVMYNCKDEHLASISLKGDLILHNLASGTRAAELKDPNEQ
VLRVLDYSRISRHVLVTAGDNGSVHMWDTTGRSPKVSWLKQHSAPTTGVCFSPSNDKIIA
SVGLDKKLYTFDSGTRKSTSCIPYEAPFSSLAFRDDGWTLAAGTSSGRIVFYDVRGKPQP
LTVLRAYSSEAITSLCWQRSKPIIVNESTCTAEIALLGGTGEESILMPDPLPSLTSSSLS
SATVLVGSRNSGRSVSVADASLLTTTSSGSISTTSYLSAVEETPHRNLLWKGGALSRLHA
PRSNYNFNDDMEVFSPLVEVQPITPSLGTWWDEHEDAKNDHDRKPSSLFPSSARRFPYTE
EGSMDPHPISHWKSNSTSKQDDTPSTLSLPSSMPITPPEAWGGDGLSDKLSHLRPAVPKQ
SRFMTSGLLTSGASSSVFTGLQDSSASTSHTSISSLTHTITSSTSLHGKDISNHETLSGF
PFSSTSSPFGTKTIAGQANLEFPGSIQLALPRKYSSYAERMSTVSSSGDGASHVIGSPKL
KKTGAEIREELVNSFSRSDTSATVSRLLPTTNGAVLQPQTQKSLAQTEQQQGTSSFMLQL
VQRTLEETLTSVQKSIHEDMRNLHIELLRQFHMQETEMSSLMTSVLEKQAELMKEVQSLR
KENQQLRQLL
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatgaacttaatggatccctcgactgcccttttggctgcttgtggaggcgacaccgtg
aagcttttcgatgtttcagaggggacgggtagcagcgatccctgcaccttgagctacgtg
ccgtcgcctggtttccaagtgaactctgtcaaatggaatcacactaatttagttgttgca
agtgcaggagatgacaagaagatttcactatggcggaaaaatgggcagagtatgggaaca
gtcccgacttctgggagtgatgttggagacaacattgatgaatccatattagctatcagc
tttagcaacaaaggttctaggtatctttgttctggaggtagcagtcaaattgtaagagta
tgggatctgcagaggaagcgctgcatcaagtggctgaaaggtcacacagatacagtcact
ggtgtaatgtataattgcaaagatgagcatttggcatcaattagtctgaagggcgatctt
atccttcataacctggcttctggaacacgggctgctgaactcaaggacccaaatgaacag
gtattaagagtgcttgattattctcgaattagccggcacgttttggtgacagcaggtgac
aatggatctgtacacatgtgggataccacggggcgaagtccaaaggtttcttggctgaag
cagcattctgcaccaacaactggtgtttgcttctcaccatcaaatgacaagataattgct
agtgttggtctggataaaaagttatatacttttgattcggggactagaaaatcaacatcc
tgtattccctatgaagctcctttctcttcactggcatttagagatgatggttggacactg
gctgctggaacgagtagtggtcgtatagtattttatgatgttcgtggaaaaccacagcct
ctcactgttcttcgtgcttatagttctgaggctattacaagtttatgctggcaaagatca
aagcccatcattgtaaatgaaagtacttgtactgctgagattgctctgctgggtggcaca
ggggaagaatcaatccttatgccagatccactcccttctttgacatcatcaagcctttct
tcagcaacagtgctggttggttcccgtaattctggtcgttcagtttctgttgctgatgca
tctctgcttacaacgaccagcagtgggtcgatatcaactacgtcatacctctcggcggtg
gaggaaactccacatcgtaaccttttgtggaaaggtggggctttgtcaaggttacacgcc
ccacgttctaattacaacttcaatgatgacatggaagtgttttcaccactggtggaagtt
cagccgattacaccctcacttggcacttggtgggatgagcatgaagatgcaaaaaatgac
catgataggaagccctcatcgttgtttccttcgtcggccaggagatttccgtacactgaa
gaagggagtatggatcctcatccaatctcacattggaaatcgaattcaacttccaaacag
gacgatactccatctactttgtcactgccaagttctatgcccattactcctcctgaagct
tggggtggggacggattgtctgacaaactatctcatctccgcccagcagttcccaagcaa
tcacgctttatgaccagtggcttgttaacatctggcgcttctagttccgtattcacaggc
ttgcaagattcatctgcatccacaagccacaccagtatcagctctctaacacatacaatc
acaagttctacaagcctgcatggcaaagacatctccaaccacgagactctttctggtttt
ccatttagttctacttcttcaccctttgggaccaaaacgatagcaggccaggcaaatctt
gaatttccagggtcaatacaattggccctccctagaaaatattccagctacgctgagagg
atgagtactgtttcttcctcaggtgatggagcgagccatgtgataggttcaccaaaacta
aagaagaccggtgcggaaatacgggaagagcttgttaatagcttctcgaggtcggataca
tcggccacagtgtcaaggcttcttccaacaacaaatggagctgtgttgcaaccccaaacc
caaaagagcttagctcagacggaacagcagcagggaacctcatcatttatgcttcagctt
gttcagcgcacgcttgaagaaacactcacatccgtacagaaatccatccacgaagacatg
aggaatctccacatcgaactactaagacaatttcatatgcaggagacggaaatgtcaagc
ttgatgacatcggttctagagaagcaagccgagctgatgaaggaagtgcagtcgctccga
aaagagaaccagcaacttaggcagttactttga

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