Magnolia sinica: 131232595
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Entry
131232595 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131232595 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131232595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131232595
Spliceosome [BR:
msin03041
]
Complex C
Other components
Step II factors
131232595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD_LRWD1
eIF2A
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SCAP
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
131232595
NCBI-ProteinID:
XP_058084918
LinkDB
All DBs
Position
18:complement(22770536..22783249)
Genome browser
AA seq
598 aa
AA seq
DB search
MDLLQNYSEKSDSDDDSQQRQQPSAQTSPPSSPESSPSSSPLRISLPSKTSAPSVDDTML
ALTVTSSNPSLRNLHKPIDPVQHAVTFNPTYDQLWAPIYGPAHPFAKDGIAQGMRNHKLG
FVENAAIEPFVFDEQYNTFHKYGYAADPSASAGYNYVGDLDALRENDAISVYNIPQHEQK
KRKLEKKALESEENEDAEVGPSVEDPASQEWLMKNRKSPWAGKKEGVQIELTEEQKKYAE
EYAEKKAEKERGGGGDKPEFADKSTFHGKEEHDYQGRSWIAPPKDAKATNDHCYIPKRWV
HTWSGHTKGVSAIRFFPKHGHLLLSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFS
NDGTKFLSAGYDKNIKYWDTETGKVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIV
QWDMNSGEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM
HSMPSISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIAAGYACQVNFSPDGR
FVMSGDGEGRCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGMIKYWD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctacaaaattacagtgaaaagagcgattcggacgatgactcacaacaacgg
cagcaaccatcagctcaaacttcccctccttcatctcccgaatcttctccttcttcctcc
cctctccgaatctctctcccctccaaaacatccgcaccgtccgtcgacgacaccatgctt
gcactgaccgtaacatcatccaatccaagccttcggaatctccacaaacccatcgaccct
gtccagcatgccgtcaccttcaaccccacctacgatcagctctgggcccccatctacggc
ccagcccaccccttcgccaaagacggcatcgcccagggcatgcgcaaccacaagcttggc
ttcgttgagaatgctgccattgagccgtttgtctttgacgagcagtacaatacgttccac
aagtacgggtatgccgctgatccatctgcctccgccggctataattatgtcggcgacctt
gacgccctgcgggagaacgatgctatctcggtgtataacattccacagcatgagcagaag
aagcggaagcttgagaagaaggcgttggagagtgaggagaatgaggatgccgaagtaggg
cccagcgtcgaagaccctgcatcgcaggagtggctgatgaagaatcggaagagcccgtgg
gctgggaagaaggaaggagtgcagatagagctcaccgaggagcaaaagaagtacgcagaa
gagtatgctgagaagaaggctgagaaggagagaggtgggggcggggacaagcccgagttt
gctgacaagagcactttccacgggaaagaggagcacgactatcaggggcggtcatggatt
gctcccccgaaagatgcgaaagccacgaacgatcattgctacattcccaagcggtgggtc
cacacgtggagtgggcacacaaagggtgtttcggcaatccggttcttcccaaagcatggg
catcttctcctctcagctggcatggatacaaaggtcaagatctgggatgtattcaattca
ggcaagtgtatgcgtacttacatgggtcactcgaaggcagtccgtgatatctccttctcg
aatgatgggaccaagttcttgagtgccggctatgacaagaacatcaagtattgggataca
gagacagggaaggtgatctcaactttctctacaggtaaaatcccttatgtggttaagctt
aatccagacgaagataagcaaaacatactcctcgcgggtatgagtgataagaagatcgtt
cagtgggatatgaacagtggagaaatcacacaagagtatgatcagcatttgggtgcagta
aatactattacatttgtggacaacaaccggaggtttgttacttcgagtgatgacaagtcc
ctccgtgtgtgggagtttgggattcccgtcgttattaagtatattagcgagcctcatatg
cattcaatgccttctatatcacttcaccccaattcaaattggctcgcggcgcagagttta
gacaatcagattctcatctatagcacgagggagaggtttcaactcaacaagaagaagagg
tttgcggggcacatagcagcaggctatgcatgccaggtgaatttttcacctgatggacgg
tttgtcatgtctggagatggtgagggcagatgctggttttgggattggaagagttgcaaa
gtctttagaactttgaaatgtcacgaaggggtttgtattggatgtgagtggcatccatta
gagcagagcaaagttgcgacttgcggctgggatgggatgatcaagtactgggactaa
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integrated database retrieval system
