KEGG   Magnolia sinica: 131232598
Entry
131232598         CDS       T09699                                 
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
msin  Magnolia sinica
Pathway
msin03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    131232598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msin03009]
    131232598
Ribosome biogenesis [BR:msin03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    131232598
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Utp13 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR75_2nd Cytochrom_D1 WD40_like WDR54 SGL Nbas_N Beta-prop_LRRK2 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 131232598
NCBI-ProteinID: XP_058084922
LinkDB
Position
18:4756858..4772421
AA seq 884 aa
MASGSLKRNYHCVPSLQQFYTGGPFAVSSDGSFLTCACDDKIKIVDSSNASIRATLEADT
ESVTALALSPDDKLLFSASHSRLIRVWDLSSLKCLRSWKGHEGPVMGMACHSSGGLLATA
GADRKVLVWDVDGGFCTHYLKGHKGVITSIMFHPDPNCLFLFSGSDDATVRVWDLSTKKC
MAVLEKHFSAVTSLALSEDGWTLLSAGRDKVVNLWDLHSYSFKMTVPTYEVLETVCVIHN
GTGFSACLNKHNGKKKKTGSPPVCFLTTGERGIVRIWSSEGAVCIYEQRYTDATVSSDED
DVRRGFTSAVILPSDQGLLCVTADQQFLFYCPAESLEGSFHLNLNKRLVGYNEEIVDLKF
LGEEEQFLAVATNLEQVRVYDLASMSCSYVLAGHADIVLCLDTCVLSSGKTLIVTGSKDN
TVRVWEDNNRCSIGVGTGHMGAVGAVAFSKKRKSFFVSGSYDRTLKVWSLDGLLENGSEV
INLKVKAVVAAHDKDINSLAVAPNDNLVCSGSQDRTACIWRLPDLVSVVVLRGHKRGIWS
VEFSPVDQCVITSSGDRTIKIWAISDGSCLKTFEGHTSSVLRASFLTRGTQFVSCGADGL
VKLWTIKTNECIATYDEHEAKVWALAVGKKTEMLATGGGDAVVNLWHDCTAADKEEAFRR
EEEGVLKGQEMENAVSVADYTKAIQLAFELRRPHKLFDLFAELCREREAEDQIEKALHVL
GKEEIHLLFEYVREWNTKPKLAHVAQFVLFQVFNILPPTEIIEIKGISELLEGLIPYSQR
HFSRIDRLLRSTFLLDYTLTGMSVIDPETDSLESKDGSMLHSDDVQASMPFSAEIDGREQ
NQGSTEVREEKVSSKKRKSSKSRSGAKKFKETKYVDGSAVALQA
NT seq 2655 nt   +upstreamnt  +downstreamnt
atggcgtctgggagcttgaagaggaactaccactgcgtgccttctctccagcagttctac
acgggtggccccttcgccgtctcctccgacggctcgtttctaacgtgcgcctgcgacgac
aagataaagatcgtggactcgtcgaacgcgtcgataagggcgaccctggaagcggacact
gagtcagtcaccgcgttggctctgagtcccgacgataagctcctcttctccgccagccat
agcaggcttattagggtttgggatctctcctctctcaaatgcctgcgttcttggaagggg
catgagggtcctgtgatgggcatggcctgtcattcttccgggggcttgcttgctactgca
ggagctgataggaaagttcttgtttgggatgttgatggaggcttctgtacacattacttg
aaaggtcacaagggagtcataacgagcatcatgttccatcctgatccaaactgcctattt
ctgttctctggaagtgatgatgcaactgttagagtttgggatctttctactaaaaagtgc
atggcggtgctagaaaagcatttctcggcagttacttctttggcactatctgaagatgga
tggaccttgcttagtgctggaagagataaggttgtaaatttatgggaccttcatagctac
agcttcaagatgactgtgccaacatatgaagtgcttgaaaccgtttgtgttattcacaat
ggaactggcttttctgcttgtttgaacaagcacaatgggaagaagaagaaaactggctca
ccaccggtgtgctttttgactacaggagagcgtggtattgtacgaatttggagctctgaa
ggtgcagtctgcatatatgagcaacgatatacagatgccactgttagttcggatgaggat
gatgtcagacggggtttcacatcagctgttatattaccttcggatcaaggattgctctgt
gtcacagctgatcagcagtttctattctattgtccagcagagtctcttgaggggtcattt
cacttaaatctaaacaaacggcttgttggttacaatgaagagattgtggatcttaagttt
ttgggtgaggaggaacaatttcttgccgtagctacaaacttggaacaggtgcgagtgtat
gaccttgcatccatgtcatgttcctatgtattggcagggcacgcagacatcgttctatgc
cttgacacatgtgtcttaagttctgggaagacacttattgtaactggaagcaaggacaat
actgttagagtatgggaagataacaacagatgctccataggtgttggtactggccatatg
ggagccgttggagctgtggctttttcaaagaagcggaagagtttttttgtcagtggtagc
tatgatcgtacccttaaggtatggagtttggatggtctcttagagaatggtagtgaagtc
attaatctgaaagtcaaagcagttgttgcggctcatgataaagatattaattctcttgct
gtggcgccaaatgataatcttgtttgcagtggttcccaggatcgtactgcctgcatatgg
aggcttccagatttagtatcagttgtagtacttagagggcacaaaagggggatttggtcc
gtagaattctctcctgtggatcagtgcgtgataacttcttccggtgatagaacaataaaa
atatgggccatatctgatggttcgtgcttaaaaacattcgaaggccatacatcaagtgta
ctgcgagcctctttccttactcgcggcacccagtttgtttcttgtggtgctgatggcttg
gtaaagctatggacaatcaaaacaaatgaatgtattgcaacctatgatgagcatgaggcc
aaggtttgggcattagctgtcgggaaaaagacagaaatgcttgcaactggtggtggtgat
gctgttgtcaatttgtggcatgactgcactgctgcagataaggaggaagcttttcgtaga
gaagaggaaggggttctgaaaggtcaagagatggaaaatgctgtatcagtggctgattat
accaaagcaattcaacttgcattcgaacttcgcagaccccacaaactcttcgatttattt
gcagagctttgcagggagagagaagctgaggatcaaatagagaaagctctccatgtcctt
gggaaagaagagatccatctgctttttgaatatgttcgagagtggaatacgaagccaaag
cttgctcatgttgcgcaatttgtgcttttccaggttttcaacatccttcctcccactgag
attattgagataaaaggcattagtgagctccttgaaggtctcataccctactcacagagg
catttcagcaggatagacaggcttctacgaagcacctttttattggactacactctgacc
ggaatgtctgttattgatcctgaaactgactccttagagtccaaagatggatccatgttg
cactcagatgatgtgcaagcaagcatgccattctcggctgaaattgatggcagggagcag
aatcagggttcgactgaggtaagggaagagaaggtttcctcaaagaaacgaaaatcaagc
aaatcgagaagcggggcaaagaaattcaaggagaccaaatacgtggatggatcggctgtt
gcactacaggcctaa

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