Magnolia sinica: 131232609
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Entry
131232609 CDS
T09699
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
msin
Magnolia sinica
Pathway
msin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131232609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msin02000
]
131232609
Transporters [BR:
msin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
131232609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_30
AAA_29
AAA_16
RsgA_GTPase
AAA_25
AAA_5
AAA_15
AAA_28
Rad17
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
131232609
NCBI-ProteinID:
XP_058084943
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All DBs
Position
18:complement(17079081..17096846)
Genome browser
AA seq
726 aa
AA seq
DB search
MASATLLSLPSSLNLLKPSKPLLSRRIPKSRFPLSSFTLSRQNSPPFPLYSPSFPPRSST
TRTPRGIRAAYISAPASDPNVGSVEKDPTAAESDSAAAVGSPTLISWGVIWSLLAQHKLR
LAVALASMIGCTTCTLSMPIFTGKFFEVLIGARPEPLRRLLTQVGVLYAMEPVFTVIFVI
NMNSVWEKVMATLRAQVFRRILIQKVEFFDRYKVGELTGLLTSDLGSLKDIVSENISRDR
GLRATSEVVGTICILFVLSSQLAPVLALLMLSVSLLVALYKRSTVPIFKSHGISQARLSD
CANETLSAIRTVRSFGGEKRQMSMFGRLVLAYQTSGTKLGTLKSANETLTRAMVYVCLLA
LYCLGGSRVKAGEMPVGIMASFIGYTFTLTFAVQGVVNSLGDLRGTLAAVERINHVLSGA
EIDESLAYGLERELHKKELDDDSLRLFYNNASAEMNQVLNVHSVSGLKSAINGCNVAWSG
DICLEDVHFSYPLRPDVEVLSGMNLMLKCGTVTALVGPSGAGKSTIVQLLARFYEPTRGR
ISVAGEDIRTFDKSEWAQVVSIVNQEPVLFSMSVGENIAYGLPDENVSKDDVIKAAKAAN
AHEFIISLPQGYDTLVGERGSLLSGGQRQRIAIARALLKNAPLLILDEATSALDTVSERL
VQDALNHLMKGRTTLVIAHRLSTVQNAHQIAVCSDGRVMELGTHFELLARKGQYASLVST
QRLAFE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaactctcctttctctcccatcatcgctcaatcttctcaagccttcaaaa
cctcttctctctcgaagaatcccaaagtccagattcccgctctcttcctttacgctttcc
cgccagaactcgccccctttcccgctatattcaccctctttcccgccacgctcttccaca
acccgaacaccccgcggcattcgggccgcttacatctccgctcctgcttccgatccgaat
gtcggcagcgtcgagaaagacccgaccgccgcggagtcagattctgcggctgctgttgga
tctccgactctgataagctggggggttatttggagtctcttggctcagcacaagctgagg
cttgcagttgcgctcgcatctatgatcggctgcaccacttgcacgctctcgatgccgatc
tttacagggaagttttttgaagtactcataggggcaagaccagagcctttacggagacta
cttacacaggttggagttctatatgctatggagccagttttcactgtcatttttgtcata
aacatgaattctgtatgggagaaggtgatggcaaccttgagggctcaggttttcagaagg
atactgatacaaaaggtggagttttttgaccgatacaaggttggtgaactgactggcttg
ttgacatctgatttgggttctcttaaagatattgtgagtgaaaacatttcaagggaccgc
ggacttagagcaacctctgaggttgtaggaacaatatgcatactgtttgtactatcatct
cagcttgctccagttctggcgctgttgatgctttctgtgtcccttttagttgctttatac
aagcggtctactgtacccatcttcaaatctcatgggatttcccaggcacgcctatctgat
tgtgcaaatgaaacactttcagctattcgtactgtgagatcctttggtggtgaaaagcgt
cagatgtcaatgtttggtaggctggttcttgcttatcaaaccagtggaacaaagcttgga
actttaaagtctgcaaatgaaacgctgactagagctatggtctatgtttgtttgttggct
ctttattgtcttggtgggagcagagtgaaggcgggtgaaatgccagttgggatcatggct
tcttttattggatataccttcacattgacatttgctgttcaaggggttgttaactcactc
ggcgatcttcgtgggacccttgctgctgttgaacggattaatcatgttttatctggggca
gaaattgatgagtcacttgcttatggtttagaaagagaactccataaaaaagaactggat
gatgacagtctcagattattctacaacaatgcgtctgctgagatgaatcaagtactaaat
gtgcattctgtgtcagggttgaaatcagctatcaatggttgtaatgtagcttggtctggc
gacatttgtcttgaagatgtgcacttctcttatcctctgaggcctgatgtagaagtctta
agtggtatgaacttaatgctaaaatgcggaacggtaacagcacttgtaggacctagtggt
gctgggaaaagcacaattgtacagctcttagcacgcttctatgagccaactagaggtcgt
atatcagttgcaggagaagatattcgtacatttgataagagtgaatgggctcaggttgtc
tccatagtaaatcaggaacctgtccttttctccatgtccgttggagaaaatatagcatat
ggcttaccagatgagaacgtctctaaagatgatgtaataaaggcagccaaagctgcaaat
gctcatgaattcataatttcccttccacagggttatgacactctagttggtgagcgtgga
agcctgctgagtggaggacagaggcagagaattgcgattgccagagctcttcttaagaat
gctccgcttctgatccttgatgaggctaccagtgctttagacacagtcagtgagcggctg
gttcaagatgctctcaaccacctaatgaaggggaggacgacattggtgattgctcataga
ttaagcactgtgcagaatgcgcatcaaatcgcagtttgttcagatgggagggtcatggag
ctaggcacccactttgagttgttggctaggaagggtcaatatgcttcattggtcagcact
caaaggcttgcatttgaatga
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