Magnolia sinica: 131232828
Help
Entry
131232828 CDS
T09699
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
msin
Magnolia sinica
Pathway
msin00906
Carotenoid biosynthesis
msin01100
Metabolic pathways
msin01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
131232828
Enzymes [BR:
msin01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
131232828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Thi4
FAD_oxidored
GIDA
GDI
HI0933_like
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
131232828
NCBI-ProteinID:
XP_058085296
LinkDB
All DBs
Position
18:52027647..52039927
Genome browser
AA seq
597 aa
AA seq
DB search
MADLGLLLSPSPKTLQINGYRQSDLKLGFRSLSSAPSQTLEFRGSCRQKSRGSRSRKVFA
ANSEAVLEKPVERDGNFESYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGY
FQRDGYMFDVGSSVMFGFSDKGNLNLITQALAAVGCEMQVIPDPTTVHFHLPNDLSVRVH
REYGDFIKELTSKFPHEKEGIQKFYSDCWKIFNALNSLELKSLEEPIYLFGQFFKKPLEC
LTLAYYLPQNAGDIARKYIRDPQLLAFIDAECFIVSTVNALQTPVINASMVVCDRHFGGI
NYPVGGVGGIAKALAKGLVDKGSKILYKANVTNIILEHGKAVGVRLSDGRKFFSKTVISN
ATRWDTFGKLLKAENIPKEEENFQKIYVKAPSFLSIHMGVKADVLPPDTDCHHFVLEDEW
ARLEKPYGSIFLSIPTVLDPSLAPKGHHILHIFTVATIDDWKGLPTKDYEAQKELIADEI
IGRLEKKLFPGLKNSIVLKEVGTPKTHRRYLARDSGTYGPMPRGVPKGLLGMPFNTIAID
GLYCVGDSCFPRQGVIAVAFSGIMCAHRVAADIGLVAKAPVLDSAHLRLLRWLRTIA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttagggcttctcctctctccatctcccaaaaccctacaaatcaacggctac
agacagagtgatttgaaactcgggttccgctctctctcttcggctccctcccaaacccta
gaattcaggggctcttgcaggcagaagagcagggggtcacgttcaaggaaggttttcgcg
gcgaattcggaggcggtgttggagaaaccggtggagagagatgggaacttcgagagctac
gatgcgattgttattggatccgggattggagggctggttgcggccacacagctggcggtt
aaaggagcgagggttctggtgctggagaagtatgtgattccaggtgggagctcaggttat
ttccagagggatgggtatatgttcgatgtcggatcatcggtcatgtttggattcagcgat
aagggcaacctaaatttgattacccaagcattggcagcagttgggtgtgagatgcaggtg
atacctgatccaaccaccgttcatttccacctaccaaatgacctctctgttcgggtacac
agagagtatggtgattttatcaaagaactcaccagtaaattcccacatgaaaaggaaggg
attcaaaaattttacagtgattgttggaagatattcaatgcactgaattcattggagctg
aagtcacttgaggagccaatttatctttttggacaattctttaagaagcccttggaatgc
ttgacgcttgcatattatttgcctcagaatgcaggagacatagcacgaaagtacattcga
gatccccaattgttggccttcatagatgcagagtgtttcatagtgagcacagttaatgct
ttgcagacaccagtgatcaatgcaagcatggttgtatgcgacaggcattttggagggata
aactacccagttggtggtgttggtggaattgcgaaggcgttagcgaaaggcttggtagat
aagggtagtaaaatactctataaagctaatgtgactaatattatactcgagcatggaaag
gctgtgggagtgaggctttcagatggaaggaagtttttctccaaaaccgtaatatcaaat
gcaactagatgggatacctttggaaagcttttaaaagcagagaatattccaaaagaggag
gagaatttccaaaaaatatatgttaaggcgccatcgtttctttccattcacatgggggtt
aaagcagatgttctgccaccagacacagattgccaccatttcgttcttgaggacgagtgg
gccaggttagagaaaccatatggtagtatttttttgagtattccaactgttcttgatcca
tcattggccccaaaaggacaccatattcttcacatatttacagtcgccacaatagatgac
tggaagggtctcccaacaaaagactatgaagcacagaaggagctaattgcagatgagatc
ataggcagactggaaaagaaactctttccggggctcaaaaattccatagttttgaaagag
gtaggcacacccaagacacacaggcggtacctagcccgcgatagcggtacctatggaccg
atgccacgcggagttcctaaagggctattggggatgccttttaatacaatagctatagat
gggctttattgtgtgggggatagctgtttcccacgccaaggtgttatagctgtagcattt
tcaggaattatgtgtgcacatcgagtggctgctgatattgggctcgtagcaaaagcccca
gtattggattctgcccatcttcgactgcttcgctggttaaggacaattgcatga
DBGET
integrated database retrieval system
