Magnolia sinica: 131233221
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Entry
131233221 CDS
T09699
Name
(RefSeq) tRNase Z TRZ1 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msin03016
]
131233221
Enzymes [BR:
msin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
131233221
Transfer RNA biogenesis [BR:
msin03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
131233221
Prokaryotic type
131233221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
131233221
NCBI-ProteinID:
XP_058085847
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All DBs
Position
18:complement(40390731..40414704)
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AA seq
335 aa
AA seq
DB search
MRRCRRFQLSRHTPDPNWSPSSRSKMSSRREMNPKATAIEAEEKSIPADSPLSKGKKKES
GMEIEGYPVVGHSIGGQETCVIFPTLKMAFDIGRCPQRAIAQDFLFISHGHMDHIGGLPM
YVATRGLYNMKPPTIFVPVAIKEHVEKLLEVHRAMDQSELKHNLIGLNVGEEFHLRKDLK
VRAFRTYHVIPSQGYIIYSVRQKLKQEYLGLSGNEIKSLKLSGVEITYTVTSPEVAFTGD
TMSDFIVDPNNIDVLRARVLIMESTFVDNVMPIEHARDYGHTHLDEIVNYADRFENKAIL
LIHFSARYQSDEIQAAVSALPPILVDRVFALTEGF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttgtagacgattccaactgtcgcgacatacgccggatcctaactggtctcct
tcgagccggtcaaagatgagttcaagaagggagatgaatcccaaagccaccgccatcgag
gctgaggaaaagtccattccggccgattctccactgtcgaaggggaagaaaaaggagtct
ggcatggagatcgaaggctatccggtagtgggccactccatcggagggcaggagacgtgt
gtcatattcccaaccctaaagatggcctttgatatcggtagatgcccccagcgagccatt
gctcaggacttcctcttcatctcccatggccacatggaccatataggaggacttcccatg
tatgttgccactcgaggcctgtacaatatgaaacccccaactatttttgtgccagtagct
ataaaggaacatgtggaaaaactacttgaggtgcacagagcaatggaccaatccgaactg
aagcacaatcttataggcttgaatgtgggagaagagtttcatttaagaaaggaccttaaa
gtgagagcatttagaacttaccatgttattccaagccagggttatataatttattctgtt
agacagaaacttaagcaggagtatcttggcctttctggaaatgagatcaagagcttgaag
ttatcaggtgtggagattacatatactgtgacatcacctgaggttgcttttacgggagac
acaatgtctgatttcatagtcgacccaaacaacattgatgttttaagggcgagggttctc
ataatggagagcacttttgttgacaacgtgatgcccatagagcatgcaagagactatggt
catacccatttagatgagatcgttaattatgcagacaggtttgaaaataaagcgattctt
ctaattcacttttcagctcgctaccagtccgatgaaattcaggcagctgtttctgcattg
cctccaattttggtggatcgtgttttcgcacttacagagggcttctga
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