Magnolia sinica: 131233336
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Entry
131233336 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131233336 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131233336
Membrane trafficking [BR:
msin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
131233336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
131233336
NCBI-ProteinID:
XP_058085999
LinkDB
All DBs
Position
18:29763300..29821200
Genome browser
AA seq
1124 aa
AA seq
DB search
MYMTYGWPQVIPLQPCTCPSSEQIIYLKLINRLLLVVGPTHLELWCSSQHKVRLGKYMRD
ADSVQREGEYLQAIWSPDTKLVAVLTSSFFLHIFRVQITDKKLLVGGKQPSGLFLSSISL
VLSEKAPFSDRNLAVSNFVCDNKYILLGLSNGFLHLVSWKGEFGGSFELDGHPRGTNGTT
EPMRSLDNGSSASEGALRVPTSSHSSAGGSAIIQLELSLPLKLLVVLFSNGQVALCSISK
KGLKQKDSINAERWLNSGDAVCASVASDQQILAVGCRRGIVELYDLAENASLLRTVSLYD
WGYSTEDTGSVSCIAWAPDNTAFAVGWKFRGLTVWSVSGCRLMCTIRQIGISSVSSPMVK
LNHNFKYEPLMGGTALVQWDEYGYRLYAVEERSSDRLLAFSFGKCCLNRGISGTTYVRQV
IYGEDRVLVVQSEDTDELEILHLNLPVSYISQNWPVLHVAASKDGIYLAVAGLHGLILYD
IRNKKWRVFGDITQEQKIECKGLLWLGKIVVVCNYVDSSNTYELLFYPRYHLDQSSLLCR
KPLLGKPMVMDVFQDYILVTYCPFDVHIFHVKISGELSPLSNPVLQLSTVRELSIMTAKN
HPAAMRFIPDPLPREGISENRFASTSGSSFGQPARCLILRTNGELSLLDLDDGHERELAD
SVELFWVTCGESEEKANLIEEVSWLDYGHRGMQVWYPSPGVDPFKQEDFLQLDPELEFDR
EVYPLGLLPYAGVVVGVSQRMSFSSCTEFPCFEPSPQAQTILHCLLRHLLQRNKSEEALR
LAHLSAEKPHFSHCLEWLLFTVFDAEISRQNANKNQASIPEESANISLLEKTCDLIRNFP
EYLDVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYQTAACYILVIAKLEGPAVS
QYCALRLLQATLDESLYELAGELVRFLLRSGRDYEHASAEADKMSPRLLGYFLFRSSFKR
QPSDSKSTTVKEQSAHVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQREKS
GSARLENFASGLELIGQKLQMGTLQSRLDAEFLLAHMCAVKFKEWIVVLATLLRRAEVLF
DLFRHDMRLWKAYSMTLLSQPAFVEYYDLLKILEEQLSSIPNSE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgacctacggatggcctcaggtcatccctctccagccctgcacctgcccttca
tccgagcagatcatctaccttaagctcatcaaccgcctcctactcgttgtgggtcccact
cacctcgagctgtggtgctcctctcagcataaggtgagattgggaaagtatatgagagat
gcggattcggtccagagagaaggggagtatttgcaggcgatttggagccccgatacgaag
ctggtcgctgttcttacatcgtcattctttcttcacatttttagggtccagattacagac
aaaaaattgctagttggagggaagcagccttctgggttatttctctcatctatatctctg
gttctcagtgagaaggcacccttttcagataggaacttggctgtgagcaattttgtgtgc
gacaacaaatacattctacttggactttctaatgggtttttgcatcttgtgtcatggaaa
ggagagttcggtggctcctttgaacttgatggtcaccctcggggcaccaatgggacaact
gaacccatgcgttctttggacaatgggtcttctgcttctgaaggagcattaagagttcca
acatccagccatagttctgctggtggttctgctattatacagcttgaactgtcattgcca
ttgaagttactagttgttttgttttccaatggtcaagttgcattatgttcgataagtaag
aaaggtttaaagcaaaaggattcaattaatgctgaaagatggttgaattctggtgatgct
gtgtgtgcttcagtagcttcagaccaacaaatccttgcagttggttgtagaagagggatt
gttgaattatatgacctggcagagaatgcatcacttcttcgcactgtatctttgtatgac
tgggggtactccacggaggatactggttctgtaagttgtatagcctgggcacctgataat
actgcttttgctgttgggtggaagtttagaggtcttactgtttggtctgtatctggttgc
cgcttaatgtgcacaattcgtcaaattggaataagttccgtctcttctccaatggtgaaa
ctgaatcacaactttaagtatgagcctttgatgggcggcaccgcattggtgcagtgggat
gaatatggatacaggctctacgctgttgaggaaaggtcttcagataggcttcttgcattt
tcttttggcaaatgctgtcttaacagaggcatttcaggcacaacatatgttcgtcaagtg
atttatggtgaagaccgagtgcttgtggtgcaatccgaagatacagatgagcttgaaata
ttacatcttaaccttccagtatcttatatttctcagaattggccagttttacatgtggcg
gctagcaaagatggtatatacttggcagttgcaggtctccatgggttgatcttgtatgac
atacggaataaaaagtggcgcgtatttggagatattacccaagaacaaaaaattgaatgc
aaaggcttgttatggttagggaaaattgttgttgtttgtaactatgtggattcgtccaac
acgtacgaattgctcttttatccaagatatcatcttgatcagagctcgttactttgtcgg
aaaccgttgcttggcaagccaatggtaatggacgtgtttcaagattatatacttgttacg
tattgtccatttgatgttcacatattccatgttaaaatctctggtgaattgtcacctttg
agtaatccggttttacagctttctacagtacgagagctttcaatcatgaccgcaaagaac
catcctgcagcaatgcgtttcatccctgatccgctgccaagagaaggtatctcagagaac
cgttttgcatctacttcaggttcctcatttggacaacctgctagatgtttaatattgcgg
acaaatggcgagctttcattacttgatttggatgatggacatgagcgagagcttgctgac
tcagttgaactcttttgggttacttgtggagaatcagaggagaaggcaaatctaattgag
gaagtttcgtggttagattatggtcaccgaggaatgcaggtctggtatccatctcctgga
gttgacccctttaagcaggaggatttcttgcagttggatcctgagctggaatttgaccgt
gaggtttatcccctagggcttctcccatatgctggggttgtagttggtgtctcccagaga
atgtcattttcatcatgcacagagtttccgtgctttgagccttctcctcaagctcaaaca
atattacattgtttattacgacatcttcttcagcggaacaaaagtgaggaagctttacgg
ttagcacacttatctgcagaaaagcctcatttttcccactgtttggagtggctccttttc
accgtatttgatgctgaaatatccaggcaaaatgcaaacaagaaccaggcttcaattcca
gaagagtctgcaaatatctctcttttggagaaaacctgtgatttaatcagaaattttcct
gaataccttgatgtagtcgtaagtgttgcgaggaaaactgatgggcgacattgggcggat
ttgttctccgctgctggaagatcaacagagttgttcgaagagtgcttccaacgaagatgg
taccagactgctgcttgctatatactagtgattgctaaacttgaaggtcctgctgtgagt
cagtactgtgctttgcggttattacaggcaacacttgatgaatctttatatgagcttgct
ggagagctggtgaggttcttgcttagatctggaagagattatgaacatgctagtgcagag
gctgataaaatgtctccaagattattggggtatttccttttccgctctagtttcaagcgg
cagccttctgactcgaaaagtactacagtcaaagagcagagcgcgcatgttgcttctgtt
aagaacattctggaaagccatgctagctatttgatgtcaggaaaggaactttccaagctt
gtggcatttgtaaagggaactcaatttgatctagtggagtatcttcagcgagaaaaatct
ggatctgctcgcttagagaattttgcatctgggcttgaactaattgggcaaaagcttcaa
atgggtactttacaaagtcgcttggatgctgaatttttgttggcacatatgtgtgcggtc
aagtttaaagaatggattgtggtcctggctactcttttaaggcgtgcagaggtcttgttt
gatctattccgacatgatatgaggttgtggaaagcatatagcatgactctcctgtcacag
cctgcttttgttgaatactatgatctgctgaaaatcttggaagagcagctttcttctatt
cctaattcagagtag
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